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Simple sequence repeat (SSR)
>UN22339
AGCTATGTCTATCCCTGAGTTGAATTGAATGAAACCAAATTAATATTTCACTAAAAAACCCAAGAGACAGTAACATCGTAACTTTGCAAGAGCT
CTACATAGGACAGAGAGCACAAAAACAGAGAATAAGTAACAACTTTGCGAAAGTGTTTTGTGTACTTCTTTTCTTTTCAAGTAGTAGCTTCAAC
TTCTGCATCAGTTTCGACAGGGGAGGGAGAACTCTTCTTCCCTCGACCTCTTAAACGCGAAGAGACATTATCAATAGCCGAGTTAAGCTGTCCG
ATCTTCTCGTTCAAAGTCTCCCTTGTTTTCTCCAAACCTTCATCGTAGTAACTTGGTTGCTCTGGCTTCTTGAATCCATACTCATCTTCTTCAC
TCATTATCGATCTTCGGATCTGTGGAGCAAAGATGTAGGCGGCAGCGCCAAACAAAGCACCTCCAAGAAGAAAACCAGCTACGAAATCACCACC
ACCACCACCGCTTCCTCTCCTTCTCCCATACTCTGCACAAACTGAAAAGTTGCGAGTCCGGTTTGATTTCTTCTGGATACTCAATGAAGAGGAT
TTACAGATCGAATTGAGCTTTGCGGTGGACAGTCCATTTGCATTCACATGATGAGATTGAAAACCACCTGAGAGAGAAAGATGAGCAACAGAAG
AGGACGCCATTGGAAATGTTGAAACGAAGAGATCTGATCTTAATCTGATCTAATGAACCC |
Primers for UN22339 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCGATCTTCGGATCTGTGG |
60.034 |
20 |
CCAGAAGAAATCAAACCGGA |
60.044 |
20 |
165 |
382 |
546 |
| 2 |
GCTGTCCGATCTTCTCGTTC |
59.957 |
20 |
CCAGAAGAAATCAAACCGGA |
60.044 |
20 |
272 |
275 |
546 |
| 3 |
CTTGGTTGCTCTGGCTTCTT |
59.615 |
20 |
CCAGAAGAAATCAAACCGGA |
60.044 |
20 |
213 |
334 |
546 |
|
|
