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Simple sequence repeat (SSR)
>UN22366
GGACGAAGTTAATAAGGGGTTATGCTAAACAAAAAACAAAAGGCAGCGGTCAATAACATTAATCTTCCTTTTCATTTCCACCCTAATAAACAAA
GCTGAAAACTAAGCAGTTAAAAACAAACCAATTAAAACAATCTTTATTCTTGAAGTTAATATAGCCAAAGAACTAATCCGAGAGCTCAGCCCCG
GGACCTGTCTGCAAATTGTTGTTTCTTGATTGTCAATGTTAACGACAGTGAGTCACTTGGCTACAACTAAAATCTGGGGAGACCATCGCATCAG
GCAGATTTTTGGACAGCATGAATGTCCGAACCACCACCACCACCACTGGCCGGATTTGGATGAAAGGCCGATTGCCTCGAAAACGAACCTCCAA
CGAGTTTCAACGAAAGAAACTGTTCCGATACACCGTTTTGCCCGGACTCCCCGAGGCTGAGCTTAAACATGCCAAGAAGCTGATCAACATTAAT
CGGGGCTGCTTTTGAGTGCACAGCTGTTGGCCTGAGGATCTCGTGAGTCTCTTCCTTTGCAGGCTCGGTGACGTACGCAGCAGGCCACACCGGG
AAGGGGAATGAGTAGAATGGTGAGAAGTATGTCGGGTACAGCACTGGGAATGAACCAGGTGGTGGCTGTACTTGTAGCTGCGTTTGGATGGTGT
CTTCTGGTGTGAAAGAAGAAGAAGAAGCTGTTACTGTCGGCGGCTCCTCAGCACTAGAGTTGGTGGATTTCATGGATTCACATTCCTCTGTTTC
CAGGATCAATGGTGCTGGAACAGAGTCAGTGCTCTGTATTTGTGTTTCCATAGGAACGTCCTCGGCTTGCTGTTCTTGAGAAGAATCCACCATA
ACGTCTGTTAACTCATCAGGAATCATATCAAAGAGACTAGAACGTCTCTTGCGGCGAGACACATTAGACTGTCTGATGAAGTACTTCTGAGCGT
GGCTTGCAACTTGAGTAGGTGTCCTCGTTGTCACATAGCTCCTGGAGATACCTCTCCAATCTCCTTTTCCCAGTTTCTGTAAACCCATTAAGAA
CATCCTATGCTCCTCTTCTGTCCACGGATTCCCTTTCTTCCTCTCGCGGCTAGAAGAAGAGCCAGGAACAAAATCTTCGGAGGCGTAACCGTCG
CCGACGCCGTGGTCATGGCCATCGCCGGGAGAACCCGGATTGTTCGACCCGGCTCCTCCGAGCCCGCTCAATCCAGAGCCCGAGTAGTGGCTGA
GATTACCCATACTGGCACTTTTGCGGATCGAACCCTCTGTGAGACGGACACCGAAGAGCTTAACACCGCGGTTCGGACATGTACGTGAGTTATG
TCCATTTTGATTGCAGTGAGAACAACGGCGAGTCATAGCCGTCGATCGGATCTGATCGGACTCGAATTCGGGTCCTCCGCCGCCGTCGATCGGA
TCGAAGATAATCTCTGGAAAGCACAGAATCTGATGAA |
Primers for UN22366 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCGTTTGGATGGTGTCTTCT |
60.119 |
20 |
CTGACTCTGTTCCAGCACCA |
60.022 |
20 |
138 |
644 |
781 |
2 |
TGGCTGTACTTGTAGCTGCG |
60.217 |
20 |
CTGACTCTGTTCCAGCACCA |
60.022 |
20 |
155 |
627 |
781 |
3 |
GCGTTTGGATGGTGTCTTCT |
60.119 |
20 |
CTCTGTTCCAGCACCATTGA |
59.831 |
20 |
134 |
644 |
777 |
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