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Simple sequence repeat (SSR)
>UN22399
AGGCATAACATGTCTCATATTATAGACTTTGAAGCAAATATGTTTATGGCTCATAGAAGGGAAAATAAGCCTTAGAAGTGGGGAAACACAAATG
AAAAGGGTTAAAGAAATGCAAGTGAACTACAAAAGAGGACCAACAGGGAGTCTCTGCAACTCAAAACTATGTAGTGAGTTCCATAATGGCAGAA
ACGATATCTCCATCATTAGTCTTAAGAGCCTTAACAGCTTTGGTCTTAGAGACACCAGCTTGAGTCATCACAAGATCAATGTCCTTAGCTTCAA
CACCAGTCTCATCAACATCATCATCATCATCTTCCTCCTCTTGTGCAACAGTGGCTGCTTGAGAGGCATCAGCGTTGCTGGGGATCATAGACGC
AACATCAGGCATCTTGAACCTCTGAGCAGCTTGGGCTTGTAGCTGTGAGCTCATGTCATCAATCTTGGCCTCGCCGAATATCACATAGGTGTCA
GAGTTGGGACTCTTGAACACATCAGGCTTCGAGATGACAAACAGAACATTCTTTGATCTCTTGATTGTGACTCTGCTAACATCAGTGACAGGTT
TCATTCCAAGTTTCAGCATTGCTTTGCGGCTTTTCTTCTCGCTTCGGCTTTGCTTGGAGCTCTCATTCTCACCAGCTCCATCGACGTTGTCATC
GTCGTCGTCCTCATCGTCGTCTTCATCTCCGTCTTTTACATCCTCAACGACAACATCATTTTCCTTCTGGAGCTTTATTTGCTCTTTGATGGCA
TCCATCAATTGCTCCTCAGTGTTAACTTCTTCAACGACTGGGCCTGGCATCTTCTTCACCCTCTTTCTTATCTTCTCTTCTCTTCTTCCTTCGT
AACCAACGAAACCCTTGGAACAGCGCAGCCC |
Primers for UN22399 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAAAGAGGACCAACAGGGA |
60.081 |
20 |
GCTCAGAGGTTCAAGATGCC |
59.957 |
20 |
280 |
124 |
403 |
2 |
CAAAAGAGGACCAACAGGGA |
60.081 |
20 |
GCCTGATGTTGCGTCTATGA |
59.83 |
20 |
263 |
124 |
386 |
3 |
CAAAAGAGGACCAACAGGGA |
60.081 |
20 |
ATGTTGCGTCTATGATCCCC |
59.78 |
20 |
258 |
124 |
381 |
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