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Simple sequence repeat (SSR)
>UN22586
GGAAACATTAAAGAAAGAAGAAAACAAATCACCTGAAAATACAACAAAAAAGAAGAAAGGAAATTTTGCTTGATAAGTGTTGAAGTTAGTTTTT
GATCTTCCTTCATATTGAGATCATTCCACTATCCCTCCTCTCTTCTTATACAATCTCTCTGTTTCGTCTTTCGGTGAAACTCAGAACCAAAAAA
AAAACTCACCTTTCTCTCTTCTTTGTGGGTTAAGGAAGGTTCATTCCTCTAAAAAAAATTCGATCTTTTTGTCGGGTCAACAATGAGCAATTGG
AGAAGACAAAAGCCCAGAAACAACAACAGTAACAATTATAATCATCATCATCATCATCAACAACAACGAGGGACGACGATGACTCAATCACCAA
AGCCGCCTCTTGCTAGCTGCAAACAGTCTGTTCCTGCGTGGGAGAAGGACTTCTGTGCTAAGGTTGGTTCAGTTCCATGGTCCAAAGTCCTAGA
AGCGAAGCGGTTTATGCATCTGTACGAGAGAGTGGTCCAATGGGACGATTCAGCTGGAGAAGACGCGTTCAACAAGGCTAAATCTCATTACTGG
GCTGAGATAAACGGAGTCTCCTGTGACTTGCCTTTGCCTGATCCTGATGTCTACATTGACGATGTTGATTGGGACGCTCAAGTTGACAATGAGC
TGGTTCTTGACCTTGAGCGTGGTCCAGACCCGGGAAGAGGAGAGAGGGGAGAAGAGCATGTGGTGATTCTTGATGCTTTGTTTTCGTCTGGACA
GTATAGTGGACAAGGCTGGGGAACAGGATGGGGTGACGCTGAGGAGAATGTTGGTACTACGGGTAAACCGGAGAACACATGGGATGATCATCAG
CGTTGTGATGGGTGGAATCAGGATTCTTGGGGATGGAAGGAGGAACCAGTAGCTTGGGATCATGAGGAGAAGAAGAACAATAGGTTCGGAACAG
AGTCTTGGGACTATAGGAACAGAAACAGCTTCAACTACAAGAAGGTTGGGAACTGGAACTGTAATGATCATCGTCATCAAGGAAGAGAGTGGAG
AAAGAGAGGAGCGGCGCCACGTGAAGGAGAGCAGGTGGATGATTGTCGATGGAGAAATGGGAGAGGGAGAAGCAGAGGTGGGTTTCAGCAACCT
TCCAGTGGTTGCGGTTGGATGGAGTCCTTCTGAATCGATCAGAGTGTCTCTCTTGATAAATATTTTTGCAGAGGAAATAATCAAATAGTTTTCG
GTTATTAACTAATATAGTGAGCGTGTGAGAGTTTAGAATCATAGTGTGATGTTTTGTTCTAAACGTTTCTCAATGGTCTTTTGTCACTTTGAAT
GATGCAGATTACAAATATATATAAGTATAATACTAAAAGTTTCTGGATGTTGCAACTTGTTTATGTTTTCTTCAGTTCTTGTATATTTATTACA
CAAAACGCTTGGAGGGTGATGATCGGGAAAAGTTGCGAAATTTATACTCTCATGCCTTCGTTTTCTGTAGTCTTCTCGAACCTTTGGAGAGAAA
CAGAGAGTCTTCTGGATATTCCTCCAAAGATTTTCCATGGTATACTTCAGGGGATCTTGATGATATTGTACTTGGGTGAATCGTGTGAAAGATG
TCATCCACCATTAGAGCTAAGAACATAACAAGGAAGACTGTTCCTTTGTTTCTCTCTTTCCCCATATAGAAAGTGCCAAGCTTTGTGATCC |
Primers for UN22586 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCGATCTTTTTGTCGGGTC |
60.051 |
20 |
TCCCATTGGACCACTCTCTC |
60.048 |
20 |
269 |
247 |
515 |
2 |
TTTTGTCGGGTCAACAATGA |
59.941 |
20 |
TCCCATTGGACCACTCTCTC |
60.048 |
20 |
261 |
255 |
515 |
3 |
TTTTGTCGGGTCAACAATGA |
59.941 |
20 |
CTTCTCCAGCTGAATCGTCC |
59.95 |
20 |
278 |
255 |
532 |
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