 |
Simple sequence repeat (SSR)
>UN22613
ATTCACCCTTCTATGCTTCTCCTCTCCCCCCCCAATCTCTTCTAGGGTTTAGTGGTTGACCCCTTCTTCCCTCTAATGGGTGCCGTCGCCATCA
ATCGCAAGCGCACGGAAGATTCCATGAACTTCAACCAACAATCCCCATCCCAATCTTCGAACAAGAAACGCAGATTCTCCTTCGGAATCACCTC
TCCAGATTCCAACAAGCCATCTTCTTCGTCGAGGATCTCGAGGTATCCCGACGCGAAAGCTCCTCTCAGACGAGAGATTCACGCCCCCAGCAGA
GCCAGTCTCAGATACGGCTTGCCTAAGCCCAGACCGATCGATCAGTACAGGAGGAGAGCTTTCGATGCGTTGAGGTTCTTTACGAAAGAGAAAG
TGGTTATCGATTTGGGGGATGAAGAGCTGGAAGTTGTTGTTGATTGTGATCTTGAGGAGGAGGAGGAGGAGAAGGATGTTGTTGAGCCTCCTCC
TCCTCCTTCGAGTTCAATGCTTGATTCGATGTCTTTAGTTAGTCAAGAGAAGGCTACTACAGATGCAGCTTCCAGCCTCGCAGCTTATAAGAAG
CTTTTGGAGAGTGCTGAGAGGAGGAACCCAAAGCTGGAAGCTTTGGGGTTTGAGATTTTGTTTAACGAGAAGAAGTTGTCGCAGCTTCGTCTGT
CTCGTCCTAAGCCTCTCGAGAAGCCTCTCAAGGTGCCTGATGAACCGTTTATACCTCTCACTGATGAGGAGAAGGATGAAGTCTACCGTGCCTT
TTCTGGTAAAAATAGAAGGAAAGTCTTGGTTACTCATGCGAATTCAAACATTGATATTACTGGTGAAGTTCTTCAATGTCTTACACCATCTGCA
TGGCTAAACGATGAGGTTATCAATGTCTATCTCGAACTACTCAAAGAAAGAGAAACCAGAGAGCCCAAAAAGTATTTGAAGTGTCATTTCTTTA
ATACCTTTTTCTACAAAAAGCTAGTAAGCGACTCTGGTTATAATTATAAAGCTGTTAGAAGATGGACTACGCAGAGAAAGTTGGGATATGCTCT
TATTGACTGTGACATGATATTTGTTCCCATCCACAGGGGTGTACATTGGACCTTGGCAGTTATTAACAACAGGGATCGCAAGTTCTTGTATCTC
GATTCACTAAATGGAGTTGATTCCAAGATTTTGAATGCTCTGGCGAAATATTTGACCGATGAAGCTAAGGAAAAAAGTGGAAAAGACATTGATG
TGAGTTCGTGGGACATGGAATTTGTTGAAGACCTTCCCCAACAACAAAATGGGTATGACTGTGGAATGTTTATGCTTAAGTACATCGACTTCTT
CAGTAGAGGGCTGGGGCTATACTTCAGCCAGGAACATATGCCATACTTCCGGCTAAGAACGGCTAAAGAGATTCTGAGACTATGTGCTGACTGA
AGTTGCGTGGGCTATTATGCATGTCAAATTTTAGGAGTGCTGTTTTGCTTTCCTTTGTTGATTTGTTCAAGCTTTAAAATTTTCTACTCCTTTT
AGGCAGTGAAAGCATCTTGTCTTGTGATCTATTAAAATTGAAAACTGAAGTACAAATTAGAATTAACCTATTAAATTTTCTT |
Primers for UN22613 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGGAGGAGAGCTTTCGATG |
60.088 |
20 |
CTTATAAGCTGCGAGGCTGG |
60.131 |
20 |
232 |
330 |
561 |
| 2 |
TTATCGATTTGGGGGATGAA |
60.088 |
20 |
CTTATAAGCTGCGAGGCTGG |
60.131 |
20 |
182 |
380 |
561 |
| 3 |
CAGGAGGAGAGCTTTCGATG |
60.088 |
20 |
AGCTTTGGGTTCCTCCTCTC |
59.817 |
20 |
270 |
330 |
599 |
|
|
