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Simple sequence repeat (SSR)
>UN22727
GGGCTCACAGTCGATCTTCTGAAACCCCAAAAACTCTCAGGCGATCTCTCTCTCTCTCTCTCTCTCTCCCTGTCTCCGATTTTGGCAATCGACA
TGGCAACTCCGATGGTAGAAGACACGTCAAGCTTCGAAGAGGATCAGCTCGCGTCCATGTCCACCGAAGACATCGTCAGAGCTACTCGTCTCCT
CGACAACGAGATTCGAATCCTCAAGGAAGACGCTCAAAGAACGAATCTAGAATGCGATTCTTACAAGGAGAAGATTAAAGAGAATCAGGAGAAG
ATTAAACTCAACAAGCAGCTTCCTTACTTGGTTGGCAACATTGTCGAGATCTTGGAGATGAATCCGGAAGATGATGCTGAAGAAGACGGTGCTA
ATATTGACCTTGACTCTCAACGGAAGGGAAAGTGTGTTGTCTTGAAAACCTCTACACGACAGACAATCTTTCTACCAGTTGTTGGTCTCGTGGA
CCCTGACAGCTTGAAGCCTGGGGACTTGGTTGGTGTTAACAAAGACAGTTACCTTATTTTGGATACTTTGCCATCCGAGTACGACTCTAGGGTT
AAAGCCATGGAGGTCGATGAGAAACCTACCGAAGATTACAATGACATTGGAGGGCTGGAGAAGCAGATCCAAGAGCTTGTAGAGGCAATTGTGC
TTCCCATGACGCACAAGGAGCGTTTTGAGAAGCTTGGTGTTCGTCCACCAAAGGGAGTCCTCTTGTATGGTCCTCCAGGGACTGGTAAAACTTT
AATGGCTCGTGCCTGTGCTGCACAGACCAATGCCACTTTTCTCAAATTGGCAGGCCCTCAGTTGGTCCAGATGTTTATTGGAGACGGAGCAAAA
CTTGTCCGTGATGCCTTTCAACTAGCAAAAGAGAAAGCTCCATGCATTATCTTCATTGATGAGATCGATGCAATTGGAACAAAGCGTTTTGACA
GTGAAGTAAGCGGAGACAGGGAAGTGCAGAGGACTATGTTGGAGCTACTCAATCAGCTTGATGGATTCAGTAGTGATGAGCGTATTAAGGTGAT
TGCAGCCACTAACCGTGCAGATATTCTGGACCCGGCACTCATGCGTTCTGGTCGGCTAGACAGGAAGATTGAGTTCCCACATCCAACAGAAGAA
GCAAGAGCCAGAATCTTACAGATTCACTCGAGGAAGATGAATGTCCACCCAGACGTCAACTTTGAGGAGCTTGCAAGATCAACAGACGATTTCA
ATGGCGCACAGCTGAAAGCAGTATGTGTAGAGGCTGGCATGTTAGCTCTCCGTCGTGATGCCACAGAGGTGAACCATGAGGACTTCAATGAAGG
TATCATCCAAGTCCAGGCCAAGAAGAAAGCAAGCTTGAACTACTACGCCTAATCTCTCCCCCCATCAGTTCGATCTCTCTTTACCTTGTATCCT
TCAACTAGTTTTACATTCGGATTTGGATATTTTCAAAATACATTTAGTTGTGTTCTTTTTTCTTCTGATAAAAAGAGAATTTTTTATGATCTAA
TACTCACATTCCACTCTCTGAGAATGTGTTTGTGAGAAAATTCATAAAAGTGTAGTCTTCTCCTTTATAACACTAGAAGAAGGTGCATTAAGCG
GTAATTCT |
Primers for UN22727 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGATCTTCTGAAACCCCAAA |
60.044 |
20 |
CTTCTACCATCGGAGTTGCC |
59.694 |
20 |
104 |
12 |
115 |
2 |
GTCGATCTTCTGAAACCCCA |
60.05 |
20 |
CTTCTACCATCGGAGTTGCC |
59.694 |
20 |
106 |
10 |
115 |
3 |
CGATCTTCTGAAACCCCAAA |
60.044 |
20 |
CGTTCTTTGAGCGTCTTCCT |
59.615 |
20 |
220 |
12 |
231 |
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