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Simple sequence repeat (SSR)
>UN22746
AGTAAGCAAGGAGGCATCATTCAACGTAAATATCCAATCAAGTAATAATCTCTACACCATTTTCCTCATGTGGTTTTCAAGTTATAAAAAAAAC
AACACAAAACCACATGATGACTTCTTTTTTGCTTACATCCACAAAGGAAACAAATAATCTCCCTTCAATAAAAAGGAACAACAGTGAAGCAGCA
GATTCAAGAAAAAGAAACCAAAAAAAAGAACAGACTGAAGAATCTCTCGTAAATAAAAAACCCGACAGAGAGATAAGAGAGGACACGGACACGA
CCGTAGTAGCTTTTTTTTTTGTGACAAGTTCCGAGGAAACTTGAAAGAGTTACTAAAATTGGAGATATACAATTTTACAGTAGACAAAATGGAT
CGGTGGTGTCCAAACGAAGAATACTGATGATGCATGGGATGGATATTTATTATTATGTGATGATGATGTATCATTACCATACCAGGATGTTAAA
GCTGTAATTGACCAGGGCCTTTCCTTGATGATCTTGATGGAGGTCGACTGTTGTCTGCAACTGATGATGATCTCGAGGAAAGTGGTGGTTTATG
TTGTTGCTCTTCTTCTTCTTCTTCAGATCTCTTCACCTCCTTTGATGTAGAGGAAGAGGAAGTGGTATATGAGTACTTGACGTTATTCCTTGCC
TGGACACGATGCTGACTCTGTACATTCTCAAACTGTTGCAGCCGTGCAGCAAAATTGATTCCTTGGTGAGAACTGGTGATATTAATCTCTTCTG
CATCATCGTCCTCGTGATGATTCATATACTGAGAGAAAGGAACTCCTGAAGATGCTCTGCTTATCTGGTCTCCTCCGCCACTGAATGAGTATGT
TGGGACAGTTTTGAGTCTTGTCCGAAGTATCTTAAACGCCGCACTTTGCTGAGGAAGTAACATTAGAAGACCATAAAGTGTTTTCAGCAACCAT
GTGTATCTTCCTGGTTCCAGAAGCTGCAATCTAAGGTAAGTAAAGATTGGAGTTTCGAGAAGCCGGATCAATTTATCAAGCTGTACTAGAAATT
TGACGTTTATGTCTTCTTCCACCAATGATTGAATCACGACACTCGCGTGCTGGTACGCCTGAGCTAATAAGCAGAGGCTTATAATGGCCATAGG
CGAATGGCACCATGATGCGTACAAGGCAACGAAAAGGTCTTTCCCTTCGCGATTGACGAGTGAACCTTTTAGAAGACCTCTTAGTTTTGATAAC
TCTGGAGCTGTAAGCAAAATCAAATTCAATGCCTGAACCATGGTTGAAGCAAAGTCAAGATTATCTTCTCCCTCGAGTATAGTTGAGAGCTCTC
TATAGACTCTTTCGGCATCCAAAAGTACACACAATCTCCGGACAATAATGGCACCACGCCTTTCTAATAGAGAATTGTCAGCTCGAAAATTGTG
GACTAAGAAGACGATGAGATGGCGAAAGTACTGCGGATCTTTTGCTACACCAGCATGAACTTCCAGAACCAAGAGCACTACGTCATCAGAAGAA
TCAGATAGTGCTTTTAGCAGTGTGTCAAATATGTCATTCAGGAAGCACAGGACCTCAGTACGATGCTTGTTCAAAAGTGTTGATATCCAATTCA
AGGCTTCAATTCGAGTAGCCTCATTATCGCTTGATAGCTGCCTCCTTGCTACAGAGAGAATTGCACCTACATCAAAACCATCTGAGGGTTCCAC
ATGGATTGAACGAAGTTCTTCGTTAGTTTCACGAGCAACCACCCTGA |
Primers for UN22746 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGAGGTCGACTGTTGTCTG |
59.864 |
20 |
TCCAGGCAAGGAATAACGTC |
60.074 |
20 |
155 |
508 |
662 |
| 2 |
TCTCGAGGAAAGTGGTGGTT |
59.697 |
20 |
TCCAGGCAAGGAATAACGTC |
60.074 |
20 |
122 |
541 |
662 |
| 3 |
TTGATGGAGGTCGACTGTTG |
59.676 |
20 |
TCCAGGCAAGGAATAACGTC |
60.074 |
20 |
159 |
504 |
662 |
|
|
