 |
Simple sequence repeat (SSR)
>UN22800
GGCTCTCAAAAAAGCGACACTCCCTTTTAAGTCGGTTTTGTTTTATGAAGGTTTAGCGAGAGAGAGAGATAACAATGTCCGGCTCCGATATTCC
ACAGGCTCCTCACTCGTCGAAAGACGCTACTGATGTTGGTTGGTACATTCTTGGTGGAAACCAGGAGAGCCTGGGTCCATATACCTTCTTGGAG
CTGTGTGATCATTTCAAGAATGGTTACCTACAGGAAACTACACTAGTCTGGGCTGAAGGAAGAAGCGAATGGTAGCCACTTTCTGCTATCACTG
AGTTGATGTCTAGGATTTCTGGAGCTGAAGTTGACCAATCAGCTGGAGGTGCATCTGGGTTGGTGAATGGATATAATGCTACAACGAATCAAGA
GAAGCAAGCTTCTACTGAGGATGAGTTTGAGAAATGGCAGAAAGAGATTCAAGAAGCAGAGGCGGAGGCTGAAAGGTTGAAAAATGGCGCTGTT
GGAGATGATCAGGACAGACCTTCTTCACCACCCGAGGGGGAAGATGAGTTCACAGATGATGATGGAACTAGATATAAATGGGACAAAGCTCTTA
GAGCATGGGCTCCTCAGAACGAGCCACAGGGTAGCGCTGATCCTTATGGACTTGAAGAGATGACCTTTGCTGAGGAAGACGAAGTAATTCCAAC
TATAAACATCCTTGATACTTCTGTTGATAAGGAGGATGCCTCTAAGGATGATGTGGCTAGTAAGAAAGAAGAAGATGGCTCTGATCAGACCGCG
GAAATAAACAATAATGGAAAGAGGAAGCTGCCAGAAGAAGAAACTGAAAAGAAGGAAGCAAACAAGCCTCCAGAAGCGTGGTTTGAGCTGAAAG
TAAACCCACATATCTATGTCACTGGGTTGCCCAAAGATGTCACGATCGAGGAAGTGGTTGAAGTTTTTTCTAAATGCGGCATTATTAAGGAGGA
TGACAGTGGCAAGCCTCGCATAAAGCTTTACAGTGACAAGGCGACAGGAGAATTAAAAGGCGATGCTCTTATCACGTATATGAAGGAGCCCTCA
GTGGATCTTGCAATTCAAATCTTAGACGGTGCTCCTTTACGTCCAGCTGACAAGCTCCTCATGTCAGTTTCTCGAGCTAAGTTCGAGCAGAAAG
GGGAGAGATTTATAACAAAGCAAACCGATAACAAGAAGAAGAAAAAGATTAAAAAGGTCGAGCAAAAGTTGCTTGGATGGGGTGGTAGAGATGA
TGCTAAGATCGCAATACCTGGAACTGTTGTTCTGCGCCACATGTTCAGTCCGGCGGAGATGAGGGCTGATGAGACTCTGTGTGCCGAGGTAGAG
GAAGACGTGAAAGAAGAGAGTATGAAGCATGGACCGTTTGATTCAGTGAAGGTGTGTGAGCTTCATCCACAGGGTGTTGTGCTTATAAGATTCA
AGGATCGCAAAGATGCACAGAAATGTATTGATGCAATGAACGGTCGATGGTATGCAAAGAGACAGATACATGCGAGCCTTGACGATGGATCAGT
AAACCACGCTGCGGTTCGTGACTTTGATGCGGAAGCTGAACGGTTAGATCAGTTTGCAGCTGAACTCGAAGCTGAATAGAAAGAAACAAAATCA
CAATAATTTCTTTTGTAGAATACGTTATGTTAGTTAATAAGTTTGAGATTTAACCTATGTTTTCATTTTTGTTGTTGAGAAACCTAACGTTCTT
TCGTGTAGCAAAACAAATACCATGTCCTTATTGATACATAAAAAAAAAGAGATTACATC |
Primers for UN22800 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGACACTCCCTTTTAAGTCGG |
61.008 |
21 |
CCATTCGCTTCTTCCTTCAG |
59.948 |
20 |
246 |
15 |
260 |
| 2 |
CGACACTCCCTTTTAAGTCGG |
61.008 |
21 |
ATATGGACCCAGGCTCTCCT |
59.919 |
20 |
162 |
15 |
176 |
| 3 |
CGACACTCCCTTTTAAGTCGG |
61.008 |
21 |
CATTCGCTTCTTCCTTCAGC |
60.096 |
20 |
245 |
15 |
259 |
|
|
