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Simple sequence repeat (SSR)
>UN22883
AAACAAGTTGTAGTTATATAAATCATTGTAGGGTGAGCAAAATTCCCAAGAAAAGAAAAATTACAGAAAGACAAAAATTTAAGTCCAAGATGAT
GGGTAAAATGCTCCAAGAGAAAGAGAAAAGAATAAATACATTATTATGCTTTTCATCTGCTAAGATAAGTGCAATGCAGAAGAAATGGCAACAA
TGTTCTCCACGGGAAGGAAAAGACGCAGAATATAAAAAAATATATATAAACGAGAAGCGAAACTCAAAAACAATGTTTGATTGTACGATACAAG
ATACTAGTGCATATTTTTGGTTATTTATTATATAGATATTCATAGGAGGAATTGTTTATGCAACTGTCCACCGCCGTCAGCCTCCGCTCTCTAT
GCCGTCTTACCTTGCCGTTTCTCTTCTTCGATCTTGGCCTTAATGACAGAGTAGAGTGCAACTCCAGCAATGGCTATTCCAGTTCCGATGCCTG
TCTGCGTCGATATCTTGTTTCCGAAGATAACGATGGAGAACCCAATCACAAAGACACGTTTCAGAACGTTTCCAACAGCGTGAGTCAATGGTGC
TACCCTCTCCAATGTATTAGTAGCCAACTGGTTGTAGAGATGGTAAAACATTCCAACCCAGAAGAGATCAGAGATGAACTTAGTCATTCCCACT
TTAGCAATCGCGTCGCTGAAACCATGTTTCAATAGCTGAGGCCCTTCGACGATGATGGCAGGAGGAAGGCAAACGAAGAGAGCGATAATGGAGA
TGTAAGCGTATACATTTGTACTGTCCATATCAGTCATGGCTTTCTTGGAGAAGATGCTTCGGTAAGTGAAAGAGATGTTTGATATCATCGCGCT
GATGAAACCAAGCCAGTTGAACGACAACTCAGTGAGCGAAGCCATTGCAACTCCGAGTACAACAGGAGCTAAAGACAACCATAGTGTTATGGGG
ATTGGTTGTCCAAGAAGAAACTGAGAAGCAGACGCATTGAAGAATGGCTCCAGCGCTTTGATGGTGTGAGTGAAGGAGACAGCGACAGCGGCGA
AGGAAACGTTGCTAGTGACATGGCCTATGGCGTGACAGACTGCAACTGGTATCAATACCTTGAGGATGTTCGAGTTAATTGGTGCCCGTTTAGG
AAGTCCCACGGACCAGCTCAGCAAGCAGTAGACAACTCCAACGAACAAGTGAATAACCGATACAAAATAGGGGTAAGGGAAGTAATTGTAGATC
TTCTTGTTAAGGATGTTGAAAATCACATTCAAGAAGTACCACATGAAGAAGAAGAATCCGGTGACGAGCCACGGATACTTCCCGAGGAATCCAA
CTTTCGTCTCCCCAGCTGAATCACCACCTTCTGCAGCGGCGGCTCTAACCGGCTTGAGAATCTCTCTTTTCTCCGGAGAGCTATCGAGAAGGAG
CACCGGACGGAGCTGACGACCGGAGATCAGGTTCCCTCCCTCTCCGATTGATCCGATCGGCTTGGCGCAAGCCGTGAACGACGACGACGACGCA
GTGCTGAATTGGCGGTTGATCGCTCTGATCGGTCGCCTCAGTTGCGGCACGCCGGTGACCGTTGCGGTGGCGCGTAGCAGCACGCGTGACTCCA
TATCGAGATTGATTCAGTGGTTTTCGACGATGAGTTGTGACAGTCC |
Primers for UN22883 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATCAGGTTCCCTCCCTCTC |
60.012 |
20 |
TCATCGTCGAAAACCACTGA |
60.24 |
20 |
197 |
1435 |
1631 |
2 |
GAGATCAGGTTCCCTCCCTC |
60.012 |
20 |
TCATCGTCGAAAACCACTGA |
60.24 |
20 |
199 |
1433 |
1631 |
3 |
GATCAGGTTCCCTCCCTCTC |
60.012 |
20 |
CAACTCATCGTCGAAAACCA |
59.691 |
20 |
201 |
1435 |
1635 |
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