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Simple sequence repeat (SSR)
>UN22909
GCAGCAGTAAAGAACCCTCATTGCAACATCACAACCGTGTTCATACATTTCCGAGAAAGCTCTGTGTTTTTTTTTTAATTATTAACCGTAAGTC
ATCATAACAGATAAACAGAGGCAAATGTATCCTCAAAACAGCAAAGAAAAATCGATCCAATTACATGAAAGGATTCGAAGGACCCAGGAAAACC
ACCCTAGAAGATTCAATTGAAGGAACCACCACCACCACGCTTCTGCTTCTGGTCACTAGCGACCTCTCCTTCGTTAGGGAAAAAGCCCATGAGT
CTACCCGCGGAGTTCTGGTAAGCGTACATGAAACCACCCATGACTCCGATCAATCCTCCCGTCACCATCGACGGTCCCTTGATCCCTGGTTTTA
TCCCTGATAGGTAGCCGACGGTTACGGAAACGCCGGTGATGGTGGAGAAACGGAGGTAATCGAGTACGCTGAAGTTTCCGACGACTTTCGTGAA
CGGAGGGTTCCGATCTACGACTGGGTATTGGGGCTTCTCCAAGGCTGTGATGTCAGTGTTCATCTTCGATCGATCTACGAATCTCCGCTTCTCT
CAACTGTGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGTTTATTCAATCGCAACAGAAGCAGGAGGAGACACCC |
Primers for UN22909 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGATCTACGAATCTCCGCT |
59.939 |
20 |
GGTGTCTCCTCCTGCTTCTG |
59.986 |
20 |
105 |
540 |
644 |
| 2 |
TGGAGAAACGGAGGTAATCG |
60.066 |
20 |
GGTGTCTCCTCCTGCTTCTG |
59.986 |
20 |
226 |
419 |
644 |
| 3 |
GAAGTTTCCGACGACTTTCG |
59.853 |
20 |
GGTGTCTCCTCCTGCTTCTG |
59.986 |
20 |
198 |
447 |
644 |
|
|
