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Simple sequence repeat (SSR)
>UN23011
GGATCGCGTGGGGTTCAAAATCATCGGAGAGAGAGAGAGAGGAAGATGAGGTTTTGCTCAATTTCTCCGCCTGTGTGTGTGTTGTCGTTCTCGT
CGATTGCTCTTGCGCCACCCAGTTCCAATCTCAGTCATCGGCTTCTCCGAATTTGCGCCACTGCTGACGACGGAGTGGAAGCTCCCGAGGAGGT
TCAAACCCAATCTCCTTCCTCTTCTTCTTCTTCTGCACTCGGTAAAGACTTGAAAAAGGTGGTCAACAAGACAGCAGCAACATTTGCGCCTAGG
GCCTCCACCGCCAGTAAAAACCCAGCTCTCCCTGGAACTACTCTTTACAAAGTTTTTGAGGTTCAAGGTTATGCATCCATGTTCCTTGGAGGTG
TTCTCTCTTTCAACCTCCTCTTTCCCTCCACCCAACCTGACTTATGGAGGTTGATGGGTATGTGGTCCATTTGGATGTTCACTATTCCTTCTCT
TCGAGCACGTGACTGCCCTCCTAAAGAGAAAGAAGCTCTTAACTATCTTTTTCTCATCATCCCTTTACTCAATGTTGCTATTCCCTTCTTCTGG
AAATCTTTTCCTCTTGTCTGGTCTGCTGATACCCTTGCCTTCTTTGCCATGTATGCCTGGAAGCTTGGATGGCTGGAAAGAACCGAGTAGAGCT
ACTCCTGTTGGGATTAGAGTCTGGAAGATTCTATGTCTTCTCTTCCTTACAATGAATGATTCTCCATCCAAGCTTCTCTCTTACCAAGTACAGC
ATATCTAATATTCGAGGTACCTGGGTTTGAGTGAGGCAAACAAATGTGTACATTGCTAAATATTGGCCCCCCTTAAGTAATATTCATAGACCTC
TGAGATGGATGGTTTGTTTATTATCTAGGAAATGAAAATGCGACTTCATATACATTTTCTTATCAAGAGCGCAGCTGGTAAATTTACAGAAAGT
AAACAAGTGTGCTCTCTTTTTCTTTTCTGAATGAATAAAGAAGTGTGCTCATTGC |
Primers for UN23011 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGTTCAAAATCATCGGAGA |
59.871 |
20 |
TTGCTGCTGTCTTGTTGACC |
60.032 |
20 |
258 |
11 |
268 |
| 2 |
GTTTTGCTCAATTTCTCCGC |
59.829 |
20 |
TTGCTGCTGTCTTGTTGACC |
60.032 |
20 |
218 |
51 |
268 |
| 3 |
CCAATCTCAGTCATCGGCTT |
60.218 |
20 |
TTGCTGCTGTCTTGTTGACC |
60.032 |
20 |
150 |
119 |
268 |
|
|
