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Simple sequence repeat (SSR)
>UN23088
CAGACTGGTAGCAACATCCGCTACACAACATAAGATATATAAAGCATTTTCCATTACTAAGTCGACACATCCAAACTGTAACTTCAAACAACAC
GAAACTAGATCCATTGAATTCTTGGCGGTAAGGACAAGATCTCGACAACTAGTAGTAAAAGTTTATTCTGAAAAAAAAAACCAAAAACAAAAAA
CAAAAGATCTTGACCAGCATTTTGAATAAGGACACGAGTTTCTTGCCACAGAACCGGCAAAAGTCTATTAAAAAAAATCGTAACCAGCAGCATT
TGGATATCTCACTGCTGGGCACATTGCACACGCTGAGCACCGCCTGGACCTTCTTCATCATCATCGTCATCATCATAAGCCTCTCTCTGAGCAC
GAGCCTTCTTTCTCATCTCATCCTCCATGTCCACATCGTGCAGCGTCGTCTCTTCGCACTCGTCTATCTCCATGTCGCTCAGAGTCGCCTTTGC
TGGCTTCGGCAAAACCGCTTCAATGGCCTTTGTCTGGTTCGGGCCCAGCGAGTCTGGGAACTCTACGGTGAAGTGGATGTACAGCTTACCCTTC
ATGAAGGGCCTTTGGTGTATCGGCATTCCCTCGTCGCTTATCGCCCTGTATGAATCTGGCTTCACAACCTCTCCAGGATGCGATTTGATGAGAA
GCTGTCTTGTGTCCAAGTGAGTCAAGACGAACTGGAACCCACAGAGGGCTTCGGTTAGAGAGAGGGTGTGCTCCACGAAGAGGTCATCTCCCTT
TCTCTTGAAGGTTGAGTGCTCCTTCTGCTGAATGACGAACACTATATCTCCAGTGACCGTATCAGGCGCTTCATCTGCTTGTCCTCTGAAAGTG
ATCTTCTGACTGTGCTGCATTCCCTTCTCCACAGCTACTTCAAGCACCTTCTTCTCGGAGACAACCTTCTCTCCTTTGCACTGTGGACACCTAT
CACGATCGTTGATGGTCTCACCAGTTCCCTTGCAGTCATGGCAAGGATGCTGCATCTGCTGAATCATCCCAGGTCCAATCTGCCTGATCGACAC
CTTCATTCCCGATCCCTGGCATCCACCGCACGTCATCGAAGCTCCAGACTTCGAACCCTTTCCGTTACACTTTGAGCACAAAGCCTTCCTAGAG
AGCGAAAGCTTCTTCGTTGTTCCGAGATAAAGATCCTCTAGAGAAACCTTCAGAGGGTGAACAACATCTTCACCACGCCTCTGCCTCCTTCCAC
GGCTACTACCACCTCCGAAAGGGTGTCCACCACCACCACCACCAAAGAAGGAGGAGAAGATATCAAAGGGGTCGTGACCACCGCCTCCACCGCC
CATTCCTTCCTTGAGCGCGTCCTCACCATACTGATCGTAGATCTCACGCTTCTCTGGATCGCTTAGAACTTCATAAGCCTGAGCTAGCTCCTTG
AACTTCTCGGGATCTCCACCCTTGTCGGGATGGTTTTTGATGGCGGCTTTCTTGTAAGCCTTTTTGAGATCTTCAGGTGAGGCGGTCTTGGGAA
CGCCGAGGATCTCGTAGAACTTGGTGTTGTCGCTCTTACTCGAAGGTCCTCTTCTGAACATCTTTCTCCGTTTTTAAGAAAACCCTAAAAACAG
AGAGGAGAGATGTAGAGAGAGAGAGAGTTTGTTGTGGCTGCTCTTCGAAGACTTTGCTTAAGGTCTTGTGGAGCGGAACACTCTAGATCTTTTT
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Primers for UN23088 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGCTTCTTCGTTGTTCCGA |
59.993 |
20 |
TAAGCGATCCAGAGAAGCGT |
60.118 |
20 |
248 |
1134 |
1381 |
| 2 |
TTTGAGCACAAAGCCTTCCT |
59.993 |
20 |
TAAGCGATCCAGAGAAGCGT |
60.118 |
20 |
277 |
1105 |
1381 |
| 3 |
TCCACGGCTACTACCACCTC |
60.134 |
20 |
TAAGCGATCCAGAGAAGCGT |
60.118 |
20 |
164 |
1218 |
1381 |
|
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