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Simple sequence repeat (SSR)
>UN23088
CAGACTGGTAGCAACATCCGCTACACAACATAAGATATATAAAGCATTTTCCATTACTAAGTCGACACATCCAAACTGTAACTTCAAACAACAC
GAAACTAGATCCATTGAATTCTTGGCGGTAAGGACAAGATCTCGACAACTAGTAGTAAAAGTTTATTCTGAAAAAAAAAACCAAAAACAAAAAA
CAAAAGATCTTGACCAGCATTTTGAATAAGGACACGAGTTTCTTGCCACAGAACCGGCAAAAGTCTATTAAAAAAAATCGTAACCAGCAGCATT
TGGATATCTCACTGCTGGGCACATTGCACACGCTGAGCACCGCCTGGACCTTCTTCATCATCATCGTCATCATCATAAGCCTCTCTCTGAGCAC
GAGCCTTCTTTCTCATCTCATCCTCCATGTCCACATCGTGCAGCGTCGTCTCTTCGCACTCGTCTATCTCCATGTCGCTCAGAGTCGCCTTTGC
TGGCTTCGGCAAAACCGCTTCAATGGCCTTTGTCTGGTTCGGGCCCAGCGAGTCTGGGAACTCTACGGTGAAGTGGATGTACAGCTTACCCTTC
ATGAAGGGCCTTTGGTGTATCGGCATTCCCTCGTCGCTTATCGCCCTGTATGAATCTGGCTTCACAACCTCTCCAGGATGCGATTTGATGAGAA
GCTGTCTTGTGTCCAAGTGAGTCAAGACGAACTGGAACCCACAGAGGGCTTCGGTTAGAGAGAGGGTGTGCTCCACGAAGAGGTCATCTCCCTT
TCTCTTGAAGGTTGAGTGCTCCTTCTGCTGAATGACGAACACTATATCTCCAGTGACCGTATCAGGCGCTTCATCTGCTTGTCCTCTGAAAGTG
ATCTTCTGACTGTGCTGCATTCCCTTCTCCACAGCTACTTCAAGCACCTTCTTCTCGGAGACAACCTTCTCTCCTTTGCACTGTGGACACCTAT
CACGATCGTTGATGGTCTCACCAGTTCCCTTGCAGTCATGGCAAGGATGCTGCATCTGCTGAATCATCCCAGGTCCAATCTGCCTGATCGACAC
CTTCATTCCCGATCCCTGGCATCCACCGCACGTCATCGAAGCTCCAGACTTCGAACCCTTTCCGTTACACTTTGAGCACAAAGCCTTCCTAGAG
AGCGAAAGCTTCTTCGTTGTTCCGAGATAAAGATCCTCTAGAGAAACCTTCAGAGGGTGAACAACATCTTCACCACGCCTCTGCCTCCTTCCAC
GGCTACTACCACCTCCGAAAGGGTGTCCACCACCACCACCACCAAAGAAGGAGGAGAAGATATCAAAGGGGTCGTGACCACCGCCTCCACCGCC
CATTCCTTCCTTGAGCGCGTCCTCACCATACTGATCGTAGATCTCACGCTTCTCTGGATCGCTTAGAACTTCATAAGCCTGAGCTAGCTCCTTG
AACTTCTCGGGATCTCCACCCTTGTCGGGATGGTTTTTGATGGCGGCTTTCTTGTAAGCCTTTTTGAGATCTTCAGGTGAGGCGGTCTTGGGAA
CGCCGAGGATCTCGTAGAACTTGGTGTTGTCGCTCTTACTCGAAGGTCCTCTTCTGAACATCTTTCTCCGTTTTTAAGAAAACCCTAAAAACAG
AGAGGAGAGATGTAGAGAGAGAGAGAGTTTGTTGTGGCTGCTCTTCGAAGACTTTGCTTAAGGTCTTGTGGAGCGGAACACTCTAGATCTTTTT
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Primers for UN23088 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTCGGGATGGTTTTTGAT |
60.17 |
20 |
AGTGTTCCGCTCCACAAGAC |
60.307 |
20 |
249 |
1432 |
1680 |
| 2 |
TTGTCGGGATGGTTTTTGAT |
60.17 |
20 |
AGAGTGTTCCGCTCCACAAG |
60.444 |
20 |
251 |
1432 |
1682 |
| 3 |
TTGTCGGGATGGTTTTTGAT |
60.17 |
20 |
TAGAGTGTTCCGCTCCACAA |
59.44 |
20 |
252 |
1432 |
1683 |
|
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