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Simple sequence repeat (SSR)
>UN23177
AAAACTTACTTTCATCATAAACCCATAGAGAAGTGCGTTTAAGAGAAGGGACAGAGTTATACAAACATTTTTTTTACAAAGTTGAAGAAGAAGA
AGAAAGCAGGACATAGGCATGATGAGTGAGTAGTAGTAGTACATGATCATATGATTTTAGGAAGGAAGAAGATCTTATTGTTCTCTCTCTGTGA
TTTTCTTAATTTCATTTCCTGATGAAGTCGACACCTTTCTGAATACTTCCAGCTAGTTCTTCTTTTGCTTTCTCCAGACCAACCCTTTCGTATT
CGTTCAAGGGCCCAAGCTGAAACACTTCCTCTGCTCCTGTACGTCCAAGACGCACTTTGGTTGCAAAGAAAGCTAACTCTGTCACCTGTGAAGC
AACAAAAGAGCACTCAATGACATTCGCATCTCCTCTTAACCCGCGAAGGCAAGCATCTGCAAACTTTGCTGCAGCATATGCCATTGAAAGTGTT
GCAGATCCAGCTCCAGCTTTTGCCTCCACAACTTCAGTTCCACCATTTTGAATCCGGTTCGTGAGGTACTCAATCTCTGATTGTGTGAAGCTGC
TAGGAGGTTTAACCTGTGACAATAGTGGCAAGATTGTGACTCCAGCGTGTCCTCCAACCACTGGTACATCAACTTCTCTTGGATCAAGGCCAAG
AACTTCAGCCACAAATGTATTGGCACGAGCAACATCGAGTGTAGTAACACCAAGGAGCTTCTTAGGATCATAAGTCCCAGCTTTCTTGAAAACT
TCAGCAGCAATAGCAACAGTAGAGTTCACAGGGTTACTAATCAAGTTGACAATAGCATTAGGACAGCATTTGGCTACTCCTTCACATAGTG |
Primers for UN23177 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCGTTTAAGAGAAGGGACAG |
59.503 |
21 |
GCCCTTGAACGAATACGAAA |
60.074 |
20 |
260 |
34 |
293 |
2 |
TGCGTTTAAGAGAAGGGACA |
58.501 |
20 |
GCCCTTGAACGAATACGAAA |
60.074 |
20 |
260 |
34 |
293 |
3 |
GTGCGTTTAAGAGAAGGGACA |
59.369 |
21 |
GCCCTTGAACGAATACGAAA |
60.074 |
20 |
261 |
33 |
293 |
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