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Simple sequence repeat (SSR)
>UN23354
AGGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCTTAAGACCATGTATGGGGGTAGAGAAAGAGA
GAGCGATCGAGACGAAAAGGAGGAAGAAGATAAGCTGAAGCTAAAAGGATGGGTCAAGGAGAAGAAGACAAAAGCAAAGGCTTCGCTGATGAAG
CAGGTACCCAGCATCATCATCATCATCAATACGGTACGTTTCAAGGTGTTTCCAATTACCCTCCTCCGCGGCCGCAGAACTCTCCTCCGGTCAC
TGGTTTTCCCCAACCCTCTGCTCCCCCTGGAGTTTACGATCCACCCGCTCCTCATTACGCCCACGGGTATCAAACCGTTCCAGTATATGGTATT
GCTGAAGGAAGACCTGTGCATGTGCGACAACGCCGCCTTCCTTGCTGTGGAATTGGTCTTGGATGGTTCCTGTTCATAGTTGGGTTTTTCCTTG
GAGCAATCCCTTGGTACGTTGGAATGTTCATCATGATAGTTGGAAGGAGGATCGACCACAGGGAGAAGCCAGGATACATTGCTTGCACCATCGC
TGCTATTCTTGCAACGATTGCTGTGGTTCTTGGTGTAACTAAAGGAGCAGAAGACTGGTGATCATTTCAGTCTGTTGTGGTCAAGTCAGAACGT
TTGTATAGGTGTCGACAAACATTTGGTCTTGTATTATTATATATTCGTGGTGCTTGGAAAAAAAAAGATGTAAACTTAACAAAAGATTCGAGTT
ATTTTTTATTTGCAAGAAAAATAAGATTAAAGATGGTTTGTT |
Primers for UN23354 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACCAAAAACACAGGTCTCCG |
60.005 |
20 |
CAGTGACCGGAGGAGAGTTC |
59.835 |
20 |
248 |
37 |
284 |
| 2 |
GGGCGACTGTTTACCAAAAA |
59.975 |
20 |
CAGTGACCGGAGGAGAGTTC |
59.835 |
20 |
260 |
25 |
284 |
| 3 |
GGGCGACTGTTTACCAAAAA |
59.975 |
20 |
GTGACCGGAGGAGAGTTCTG |
59.835 |
20 |
258 |
25 |
282 |
|
|
