 |
Simple sequence repeat (SSR)
>UN23388
TTTTGACAGTAAATCATCATTTTAATGCGTATAACTGACGTCCGACAAAAGCACCGTCAAAACATAATGTTCTGTCAAAAGGCTGAAACAGATC
CAAAAGAAGAAAAAAAAGCACTTGAGAGTAATCTTCTACTACACTTTACTACCGATGAAACAATACTAGTTTTCAAAACCTAAGAAAGGTCAGC
GAGGGCCTTATCGATACCCTCTGCGTGGTTCCGAAGAGTGTTCCACTGATCCACGCTTAGAGAGATACCTTTCTTGCCAGGCAAAGTTTTACCG
TCCTTGACATAAAAATCACGTATGTCAATCCAAATTTTACCGTTCCAATTCCTCACAGAGACTCTCCTGTTCTTAGATATATTGCAGACGACGA
TGTCGTCAGATTCGTCGGAGGATTCGGCTGGCTTTGAGAGTTTCTTAGCCGGAGCGTGGGTTTCAGATTCGTCATCTGATGCTCGGACATCATC
GTCTTTTCTTTTTCCTCTCCACGACATTTTTTTTTCTCGAGCAAGTAACCTGTTAAAAAAAAAAGCTCTCTAGTCGGGACGCTGCAGCGGTAGA
GAAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTACGCTTCACCGCCGACCATGGCGAAAGAGAAACTGAAG
CCTCTTCCCACCTCTGACGGAGGTGAAATCGCCGACACTACTCCTAGAGAGAAGAAGCATAAGAAGAAGAACAGGAAGCGATCTGAACCCGATC
CCGATGTGCCTTCAACAACAAGAGAGCCGCGTCATTCCGGTGTTGACGAAGAAAGGGATGGAGGGGTAGTAGAGGATGCTCATAACGAGCCAAC
AATGGGTGATAAATTCGAGAGTCTTCATTTGTTAGAGGGAGAGAAACTTAGAAGCGAGGAGGAGAGTAATAGAGTCGATGATAAGAAGCCTCCT
ACAGCAGCCTCTGTGAACGTTCTTCTGAGACAGGCATTGCATGCTGATGATCGCTCTCTTCTACTTGATTGCTTGTACAACCGAGATGAACAGG
TGATTGCTAATTCGGTTGCTAAGTTGAATTCAGCAGAAGTTCTAAAGCTTCTTAATTCCCTTCTACCAATACTACAATCAAGGGGTGCGGTTTT
AGCTTGTGCGATTCCGTGGATAAAGTGTGTGTTACTTACTCATTCCAGTGGGATTATGTCCCAAAACTCATCTTTGATCGCTTTGAACTCAATG
TATCAGCTCATCGAATCACGAGTATCAACTCTTCACACTGCCGTAGAAGTTTCAAGCGGCTTAGACTTGCTTGTGGACGATTTGGATGAAGAAG
AAGAAGATGAAGGTCCAGTGATTTACGAGGACAAGGACACTGATGATGAAGAAGGACAAGGACCAGATGAAGCAATGGAAACAGATGAAGATGG
AGACGAATCAGCGGATGAAGCAGCTGATGGTGTCAATGCTTTTGAGGATTTTGACGACATGAGCGATTGAGAAGACTCCCCCGACAACATAGAA
AGTTTTGATTTTGTGAGTGCTGTTTGGTCGTTACATGTTCATGTCGTCTCCGAATTCTCTATTAAGTAATGGTTGATTGATTATTAGACTTTGT
ACTGAAAAAGAGGTTTATTTTTTACATTAAAAAAGGTTGACGCG |
Primers for UN23388 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTCGGACATCATCGTCTTT |
60.226 |
20 |
AGGTGGGAAGAGGCTTCAGT |
60.252 |
20 |
215 |
457 |
671 |
| 2 |
GCTCGGACATCATCGTCTTT |
60.226 |
20 |
GGAGTAGTGTCGGCGATTTC |
59.7 |
20 |
246 |
457 |
702 |
| 3 |
GCTCGGACATCATCGTCTTT |
60.226 |
20 |
TGGGAAGAGGCTTCAGTTTC |
59.405 |
20 |
212 |
457 |
668 |
|
|
