 |
Simple sequence repeat (SSR)
>UN23427
CCGTTGTGTGAAACTGAAACATTGATATAGCCACAAGTAAAAGAAGAGAAGACGATACATTTCTTTTAGCCTATTGTTTTCACAATACCAAATT
AAGAAATCACACGCTACTATATTATCGACCTAAGGAGTGAAAACATACAAACCCCCAAAGAAAAAAAAGGAAAAAAAATTTAAGAACTTAACAC
GCATGAAAGGGGATAAGAAGTACACTATTTTCGTGACTTTTACTCCCTCACGTATACGTACGCAAAACACAAAAGAAGAACAAATAATTTTATA
TTAAAACTCCACAAAAGCATTAAACCATGCAGGCTAGATCACTCAAAGGCGGTGGTGTAAAGCAGAGACCGGAGCGTGCGCAGCTGCTGCAGCT
GGAACCGGTGATTTACATTGGTAACACTTAGCAAACAGACCAAAAGTGTCGACTTGGCGAACAAAGTTGGTTACACTAGCCCATCCACCGAACC
CGAACCCGACTATTAGAACCCATATCACCACGAAAGCGTTCAACACGTACATCGCCGTCCAGCTCGGCAAGAAGAACGGTGGCTTCTCCGCCGC
ATTCTGACGAGCGGAGGCAGATCGGTAAGTGAGCATGTGAGCGAGGGAGGGGATAATATACACGGTGAAGCTAACCAGAAGAGCACCAACAGCT
GAATTGATTGGACCGAAGAACGGGAAGATAATAGCTAAGAACCATATCGGTATAACCACAGGCAATCTAGCTAAAGCCCTCAAGCAAATGCTCT
TTGTGTCATGCATCCCTATCACTTTCTCCCACACAAAGTAGAGTGGGGTACACGCGAATCCGAACGTTATAAACTGGTGAATGAGCATGAGAAT
AACGGCAGCGTCACGCCATCCGTTCTTGGGGAGAAGAGAGAACGCGTTGGAGTGGTCTAGAAGTGCGTCTCCGAAGGCCCAGTAAACGGCGGAA
GCTGACGGAAGCGTTAGTGTGAAAACATACAACGTCGCCATCAAGTAAATGTACTTAAACTTTTGTGGTTTCCACATTGCATGCATAATCTCGA
CAGTAACCGCGTGACCACCAAATGTATACAAGATATTGGTAGCTCCGGTGAAATAAAGCACTAGCTTCGTTGGACCTGTGTGCTTCACACCTTC
CGTCTGGCCGTGGATAATGGAGGCGATGGCTAAGTACCAGGCGGTGTAAGTGGTCATACCCAAGCCGAGGAATGACCAGATTCGGTAGTTGTGA
AACGACGGTATAAACACAGTGGTTGCACAGCACGCGCCGAATATATAAGTCCATGTTCTCTTGTCCAAGTGATCGTTTATGTAATAAATGTTAC
TGGCACAAGCAATGAGTTGGATTACAGATCCAAACAAGAGGAAAGTGCAATTAAATGCGAGTCCTACTGCTTTCCAGTATGTGCCGAGTAGTCC
ATCAAGTACTTCGAACCACTGAATAACATGGTTTTTGAAGCTTTTGCCTTCTTTCTCTTTACGAGCTCGATACTCAACGTAGAGAACACTGATG
AGATACGCAGTCCAGCTTCCGAGTAGACCATAGAAGATCTGTAACACTATTCCTGACAACATCCCTAGTTGACTGAACGAGTACGGTAACGTCA
AAAGCACTTGCGCCACCTGGTTAGATGCGCAGCTGAACCAAGCGTCCCAGACTGATCCACCGTGCCAGAGGAAGTTGCTTAGTGCAGAACCACC
CGAGGGGTCGTGCTCGTCGGGTTTTCCGGTGCTGGTGCCGTTGATCTGATCTACTTCGTTGTCATTTCCGCTTGAGACTATCGCCTCTTCTCCA
TGACTCACACCCGCCGACATTTTCGCCTTTAGATGTTTTCTCTTTTAGAGAAGAGAAGAAGAAGGTGAGAACGAATCAGAAGCAAACAAAGACC
AAAACTGATAGGGTCTCTCACTTGCTCTTTTCTTTTAAATAAAAAATTCTCTGTTCTCTCTATCTTTCTCTGACTTCAAGAAACAGAGCATGAA
CCCAGAAGATGGCAGAGAGGAGAGAGAGAGAGAGAGTTATGGAAAGAAGGAGAAAGACTTCTTTGATCAGAGCAAAAAAA |
Primers for UN23427 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCGACATTTTCGCCTTTAGA |
60.202 |
20 |
AAGAAGTCTTTCTCCTTCTTTCCA |
59.11 |
24 |
238 |
1800 |
2037 |
| 2 |
CCGACATTTTCGCCTTTAGA |
60.202 |
20 |
AGAAGTCTTTCTCCTTCTTTCCA |
57.845 |
23 |
237 |
1800 |
2036 |
| 3 |
TCGCCTCTTCTCCATGACTC |
60.497 |
20 |
AAGAAGTCTTTCTCCTTCTTTCCA |
59.11 |
24 |
265 |
1773 |
2037 |
|
|
