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Simple sequence repeat (SSR)
>UN23442
GCTCCTGCGCTCCTTGAAACATCCTTCTCCTTCTTCCAAGAGATCAATTCCTTCATCGCTAATCTTCGGAGAGAGAGAGATTCAAAAAAGAATG
GTGAAGATCTGTTGTATTGGAGCTGGATATGTTGGTGGTCCAACAATGGCTGTGATCGCACTCAAATGTCCACACATTGAAGTAGCAGTCGTTG
ACATCTCTGTTCCACGTATCAACGCATGGAACAGTGACCAGCTTCCCATCTACGAGCCAGGTCTTGAAGACATCGTCAAGCAATGCAGAGGCCA
AAACCTCTTCTTCAGCACCGACGTTGAGAAACACGTGCGGGAAGCTGATATCGTCTTTGTCTCCGTCAACACCCCCACCAAAACCACCGGTCTC
GGAGCTGGCAAAGCCGCGGATCTCACTTACTGGGAGAGTGCTGCTCGTATGATCGCCGATGTTTCGGCTTCTGATAAGATCGTCGTTGAGAAAT
CCACTGTCCCTGTCAAAACGGCTGAAGCCATCGAGAAGATTCTGATGCATAACAGTAAAGGGATCAAGTTCCAGATCCTGTCGAATCCGGAGTT
TCTTGCGGAAGGTACTGCGATCGCTGATCTTTTCAACCCTGACCGTGTTCTCATTGGAGGACGAGAGACGCCTGATGGTTTCAAAGCTGTTCAG
ACGCTTAAGGAAGTGTATGCCAACTGGGTTCCTGAAGACCAGATCATCACAACCAATCTCTGGTCCGCTGAGCTCTCCAAGCTGGCGGCAAACG
CTTTCTTGGCGCAGAGGATTTCTTCCGTGAACGCCATGTCGGCTCTTTGTGAATCCACCGGTGCTGATGTCACTCAAGTGGCTTACGCCGTCGG
TACGGATTCGAGAATCGGTCCCAAGTTCTTGAACGCTAGTGTCGGATTCGGAGGTTCTTGTTTCCAGAAGGACATTTTGAACCTTGTCTACATC
TGTCAGTGCAATGGTCTTCCGGAAGTGGCGGAGTACTGGAAACAGGTGATCAAGATCAACGATTACCAGAAGAACCGGTTTGTGAACAGAATCG
TATCTTCTATGTTCAACACCGTCTCCAACAAGAAGGTTGCGATCCTCGGTTTCGCGTTCAAGAAAGACACCGGCGACACTAGGGAAACACCAGC
CATTGATGTGTGCAAAGGTTTGTTAGGAGACAAGGCGCAGATCAGCATCTACGATCCTCAAGTCACTGAGGAACAGATTCAGAGAGACCTTGCG
ATGAAAAAGTTCGATTGGGACCATCCGCTTCACTTGCAGCCAATGAGCCCGACCACGGTGAAACAAGTGAGTGTGAAATGGGATGCGTATGAAG
CTACTAAGGACGCACACGCGGTCTGCGTTCTGACCGAGTGGGATGAGTTCAAGTCATTGGACTACCAGAAGATCTTTGACAACATGCAGAAACC
AGCTTTTATCTTCGATGGGAGAAACGTTTTGAATGTGGACAAGTTGAGAGAGATTGGTTTCATCGTTTACTCCATTGGTAAGCCACTTGATGCA
TGGCTTAAGGACATGCCTGCTTTTGTCTGAACGAGAACAAGGTAATAATAATGATAATCTGGCTCATTCTTTTTCCTTCTACCTTTGATTGTTT
CTGTTTTTGCGTTTTTGCTTCTTATAACGTCTACCTTTGTTGTTCGTTTTCTTATATAAGCTCTCGTAATTTTTGTGTTTCAAATTTTGTTGAA
CAGACTACTACTTTGTATTCGATACATTTGCATCATTTTTCGTTGTTTCCTTAGAAAAGCAATAATGTTTAGTTTTTAATTCG |
Primers for UN23442 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCGCTCCTTGAAACATCCT |
60.355 |
19 |
ATGCGTTGATACGTGGAACA |
59.995 |
20 |
209 |
7 |
215 |
| 2 |
GCGCTCCTTGAAACATCCT |
60.355 |
19 |
CATGCGTTGATACGTGGAAC |
59.995 |
20 |
210 |
7 |
216 |
| 3 |
GCGCTCCTTGAAACATCCT |
60.355 |
19 |
GTTCCATGCGTTGATACGTG |
59.995 |
20 |
214 |
7 |
220 |
|
|
