 |
Simple sequence repeat (SSR)
>UN23872
GGATAATTGATTTTAAATAAATAATTTTCTAAGAAACAAAAAAAAAATGCAGAGAGAGAGAAGGAGAAGACGACAGGAGAGAGAGACGACCATA
TTGTCAATAGAGAGAGAGAGAGAAGAAGAAGGAGAAAGACGGAGACAACAATGGCGGAAGAAAATGGGGAGAAGAACGAAGGAGGTGAAGAAGA
AGAGAGCGTTAAGGTTTTCGTCGGGCAAATACCGAAACACATGTCGGAATCTCAGCTCCTTACATTGTTTCAAGAGTTCGCTGTCGTCGAGGAG
GTTAACATCATCAAGGACAAGATCACACGCGCCTCTCGAGGATGTTGTTTTGTAATATGTCCATCGAGAGAAGAAGCAGATAAGCTGGTCAATG
CTTGCCATAACAAGAAGACATTACCTGGTGCAGCTAGTCTATTGCAAGTAAAGTACGCAGATGGCGAACTGGAAAGGCTAGAGCACAAGCTTTT
TGTTGGTATGCTTCCAAAGAATGTCTCTGAAGCTGAACTTCTAACTTTATTCTCCAAGTATGGGACCATAAAGGATCTACAGATTCTAAGAGGT
GCTCAACAAACAAGCAAAGGCTGTGCTTTTCTCAAGTATGAGACAAAAGAACAAGCTGTTTCTGCCATGGAAGCCATCAATGGAATACACAAAA
TGGAGGGTTCAACTGTTCCTTTAGTTGTCAAATGGGCAGACACAGAAAGGGAAAGACACACAAGAAGACTTCAAAAGGCTCAATCTCACATCGC
TAGAATAGCTAACGCTGACCCAACAAACCCCTCTTTGTTTGGAGCATTGCCCATGAGTTATGCTCCACCATATAATGGATATGGTTACCATCAG
GCTCCTGGAACTTATGGTTACATGCTACCACCAATTCAGAGCCAAGCTCCATTACCCGGTATAGGTAATAGCAACGCGTTGCAAAGAACGTCAC
CTGACTCTGTGCCACCTCGCTTGGCCCGTAGAAACATTCCTTTGCCTCCAGCGAACTACATGGGCTCTGGTTATCCTCCTGTAAGAGGTCTCCC
TTATCCATTGGCTTATCCCAGATGGATTATGAATCCTCGCCCTCTAAGTAGCTCTCCTGGATCCATATCACCTGGCGGGTCAACACCTCTAGGA
ATTGGTTTGAGTTCCGTGGTTCAAACTCAAACCGAAGGTCCGGAAGGTGCTAATCTGTTTATATATAATATACCTCGTGAATATGGGGATCAAG
AACTCGCGGCTGCGTTTCAACCTTACGGTATTGTTCTGAGCGCAAAGGTGTTTGTAGACAAAGCCACTGGTGTAAGCAAATGTTTTGGTTTTGT
TAGTTATGACTCACAAGCAGCCGCTCAGAACGCTATTAACATGATGAATGGTCGCCATTTAGGCGGTAAGAAATTGAAAGTCCAGCTTAAGAGA
GACAACAACAACAACAACAACAATGGTCAACAGAGTAGTTAAAACGCCTTAAAACTCTCCTCAACTACAAAATTTCATGACGAAAAACAAAAGG
TCGGGTAATGGGTCGACCCGTTTCAAGATTGGGACTAATCTTGAATGCATGCAGCTGTGTATAACTCCAAAACTCTCAAACCAAATCAAAACCT
GTAACTTCCTCTGCAAGTGGATCATCTTTTTCTTTTTTATTTTATTTCTTCAAAATAACAATTTGTAATTTATGCATCATTGAAATTCATGTAG
ACATTTTATGATTTATTAACATTAAATTCATTGAACTTTT |
Primers for UN23872 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTATGACTCACAAGCAGCCG |
60.011 |
20 |
GACCCATTACCCGACCTTTT |
60.053 |
20 |
199 |
1320 |
1518 |
| 2 |
CAAAGCCACTGGTGTAAGCA |
59.904 |
20 |
GACCCATTACCCGACCTTTT |
60.053 |
20 |
238 |
1281 |
1518 |
| 3 |
AGCCGCTCAGAACGCTATTA |
60.138 |
20 |
GACCCATTACCCGACCTTTT |
60.053 |
20 |
184 |
1335 |
1518 |
|
|
