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Simple sequence repeat (SSR)
>UN23877
AATATAATGAAATCTATGCACTTTGATAAGACTTCAGTGTTGATTTATTAATTAGTCTATATTCACAAGCAAGCTGTGTAAAACTGTGAATCAC
ACACACACATATATTAATGGGTTTAATGTATAAACCACACATTTTACATATTCGGTGAATATTCTATAAGGACACGATGACTTATTAATTAAAT
AGGGCATCACTAATGATTTCTCCTCTTGATCTTAACCTTTAGCCCACCAGCCATGTGAGCCGTTAGAAGAGGAACAAGTACCGGTCGGTTTTCG
CAAACCGGTATGATCTCAAACCGGCTCAAAACCGAACCAACCACGTATTTCATCTGCATAAACGCCATTTCTTTGCCTATACAAACCCTTGGCC
CGGCTTGGAACACAGGAAACTTGAACGAGCTCACACTTTTCAAAACCGGTTTTGTACCGTAGTTTGGTTCCTCCTCAAACCATCGGTTCGGTTT
AAACTCGTCCCAATCTCGACCCCACACGTTCTCCATCCTTCCCATACCGTAAGGGAAATAAGTAACCTTGTCTCCTTTTTTCACTCGTGTCCCG
TCTGGTAAAACGTCGTCGTTTGCTGCATGCTTTGAGTCCCACGCCACTGGTGGGTAAAGCCTCATCGCTTCGCAGAGACC |
Primers for UN23877 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAAGCAAGCTGTGTAAAACTGTG |
60.026 |
23 |
GAAATACGTGGTTGGTTCGG |
60.227 |
20 |
268 |
66 |
333 |
| 2 |
CACAAGCAAGCTGTGTAAAACTG |
60.026 |
23 |
GAAATACGTGGTTGGTTCGG |
60.227 |
20 |
270 |
64 |
333 |
| 3 |
CAAGCAAGCTGTGTAAAACTGTG |
60.026 |
23 |
TACGTGGTTGGTTCGGTTTT |
60.262 |
20 |
264 |
66 |
329 |
|
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