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Simple sequence repeat (SSR)
>UN23961
AAGAAAAAAGATAACTTCGTACATTCATAATCATATGATATGGTGGAAGGTGCAAAAAAGGTTACAAAACTAAACATCTAAAAGAAACCAAAAA
ACATTGCGTTTTGCCAAACAGATAGGCGAAATCGTCAGAATAAACAATTATTTCACTTTCGCATGAAACAATATCGTTTCAGGAATATATATAT
ATATGCTTTCGAAGTTCTTTAAACAACGCTTTCTTGACGTTCACTTAGTGATCTCTTTAGTCACTGGAGGGATATCGACAACTCCGTCACAGTT
TCCACCGTCAAGAGCTGGCTTCTCCGGCATCTCCTTCTTCTCCTCAGCAGCTACATCCTTAGGGCCCAAGAAACTTGGCTGATTCGTAGAAGAC
AACAGCCTTGCCCACATTCTATCCGTAATCACCACATTGTTCTGTTTCTCTGTTATCCTGTAGTACGGAATGTATGTTTGTCTTCCATGGACAA
GACCACTAGTGTAGCCAGTGTAACCAGCCATTGCACCATGAACCGCGCTCTGAGCTAGGAGTGTACAGTATACATTGTCTGATGCATTGCTTGG
AACAGCCCGGATCATGTATGTAGGATCTATGTATTTGAGATTCATCACCATATTAATCTTCTTAAAATAATCCTTGATGCTTTGTGATAGCCAT
AAGCCGACATCTTTAAGAAGCTTGTTACCAGAGGCGTCAGTGCTAGATTCCATGCTTTTGGACATCAGCTCTTGCCCTGCTCCTTCAGCAAGAA
CAATCACCATGTGACATTCTCCTTGATCCGTTTCTCTATGAACTCCAGGAGCCCAC |
Primers for UN23961 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGATATGGTGGAAGGTGCAA |
59.924 |
20 |
GGTGGAAACTGTGACGGAGT |
60.009 |
20 |
253 |
36 |
288 |
2 |
TGATATGGTGGAAGGTGCAA |
59.924 |
20 |
TGAACGTCAAGAAAGCGTTG |
60.027 |
20 |
196 |
36 |
231 |
3 |
TGATATGGTGGAAGGTGCAA |
59.924 |
20 |
CTTGACGGTGGAAACTGTGA |
59.72 |
20 |
259 |
36 |
294 |
|
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