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Simple sequence repeat (SSR)
>UN24094
GGACACACACACAGGAGTGTTCCCGTGTTCTCGAGGACAAAGTATAAGCATCAACAACAAAAGCGCATTAAAAGAGCTTCCTCTGAAATCGAGA
TTAAAACAGAGCATCATCTACGCAACAAAACAGGTGTCTGATCGTTCCTGAACTCAACCTTGTTTGCTTATTCTGAAAGATTCAGACTTTCCAG
AAGAGCTGTGAATCAAATACACACTTAGTCTCTCTCTCTCTGCAGAAGGGCTTGTTAGTCGTCTCATGATCACAGGTTCACTACTGCAATGGGG
TACGTAAACGTGGAGAAGAGATGGGTGTTCCCTCTCGTCATCACATCTCTCGTCTGCGTTTTTCTCCTCGCAACCTCTTTCAACATGGGCCTCG
TCTCCTCCCCCCGCAAATTCAACGGCATCTTCTCCCTCATCCCTTCCTCCTCTCTCTCCAGGAACCAAACCAGACTCGACTACTTCGCAGAGTC
CAAAGTCGCTAAACAACAAAAAAACCGTCCTGAAGACAAGCTTCCTCGTTTCGCGTACCTCGTCTCCGGGTCCAAAGGGGACGTGGAGAAGCTC
TGGAGAACGCTCAGAGCGGTGTACCATCCGAGGAACCACTACGTTGTTCACCTGGATCTTGAATCCCCCGTTGATGAGAGACTAGACCTGCTTC
TCGTATTAATAAGGATCCTATGTATACTAGAACCGGGAATGTCTTTATGACCACCAAGGCTAATCTTGTCACGTATAGAGGACCCACCATGGTG
GCCAACACACTTCACGCCTGTGCTGTTTTGCTTAAGAGAAGCGCTAACTGGGATTGGTTTATTAATCTTAGTGCTTCAGATTATCCCCTGGTGA
CCCAAGATGATCTGCTTCATACATTTTCGACTCTGTACCGGAACCTCAACTTTATCGAACACACAAGCGATCTTGGTTGGAAAGAGGAGAAGCG
AGCAATGCCAGTAATGATTGATCCTGGACTGTACATGTTGAACAAATCAGATATATACTGGGTCACACCTCGTCGAAGTTTGCCAACTGCGTTT
AAACTATTCACCGGATCTGCTTGGATGGCTCTATCACGTCCCTTTGTAGAGTACTGCATATGGGGATGGGACAACTTACCACGAACCCTCCTAA
TGTACTACACCAACTTCGTCTCATCGCCCGAAGGTTACTTCCAAACCGTGATCTGCAACGTCCCCGAGTTCTCGAAAACCCCGCTCAACCATGA
CCTCCACTACATCTCCTGGGACACTCCCCCGCAGCAGCACCCTCACGTGCTGTCGCTCAACGACACGTCTCAGATGATATCCAGCGGTGCTGCC
TTCGCTAGGAAGTTCAAAAGAGACGACCAAGTGCTTGACATGATAGATAAGGAGCTGCTGGGAAGGAGGAACGGTGAAGATGGGTTTACTCCTG
GTGGGTGGTGCGGTGGGAAAAAACCGAAATGCTCCCAGGTCGGTGATGTGGCTAACGTTAAGCCTGGTGCTGGAGCTCAGAGGCTTCAGGGACT
TGTGGACAGGTTAGTCAACGAGGCTAAAACAGGACTTAATCAGTGTAAATAGATCCGAGGGGGCTGAGGGAATCGAGAGTGGGACTGTTTCTTA
CGATATATAATTATATATATACATATAGGGTTCCAGAGAATCTTTAGTTCGGTTTAGAAAAAGACTATTTAGACATTGTTTTTTGATTGTTGAG
TAGATGGATGCCTTGTATACCACGACAACTTACTAGTCTCATATTGGAGATTAGTTTTTCCATTGTTT |
Primers for UN24094 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAGGAGTGTTCCCGTGTTC |
60.009 |
20 |
CCCCATTGCAGTAGTGAACC |
60.375 |
20 |
272 |
11 |
282 |
| 2 |
CGCAACAAAACAGGTGTCTG |
60.338 |
20 |
TCCACGTTTACGTACCCCAT |
60.11 |
20 |
182 |
115 |
296 |
| 3 |
CGCAACAAAACAGGTGTCTG |
60.338 |
20 |
ACACCCATCTCTTCTCCACG |
60.112 |
20 |
196 |
115 |
310 |
|
|
