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Simple sequence repeat (SSR)
>UN24106
GTAGAGGGAAAATCAGTTTTATACTCTTCTTGTACGTATTCTCTCTCTTTGCTTCTTAAAAATCACACAGTAGAAGAAAGAAAGAATAATAATA
ATAATAAGGGGGGAGAGAGAGAAGAAGAAGATAACGACGAGGAGAAGAAGAAGAAGGGCCCCAATATAGTCGTCTCCGCCCCTGATTCTTTCTT
CAACTTGATATTTCATTCAACTCGTATTAAAAAAGATAGAACCACCTGCATTTGGCTTTCCTGGACCAGTTGATCGAACAATCATGGAATGAAT
GACTTGCTGTAGTAAATCATCCACACAAATCTCATCAGCTTAATAAATTTTTTATTTTGGAATGGCTGAGGCTGATCCAGACTCCTCAGATACG
TCTGATCTCAAACCCATTACCAGCAGCGCCCCGCTCTTTAGCATCCCTCGCTTTTTTGTGGCTAAAGACTCTGATGCAGTAGGGAGGAGCCCTA
CTTCTCCCCTTGATTTTTCACTCTTCGGTGGCCTCTTTAGCCCCAGGTCTCCTCCAGCTGCTGCTGCTGCTCCCTCATCTCCCAGGTTTCGTAA
CAGATGGGCTTTTGACAAAGTCGGCCTCTCTCTTCTAAGCTCCAGCGTTGGAGAAGAAGAAGGGGGGCATGAGGAGGGTTTATTCAACAACATC
GTGCTTGCCCCTCAAATCAAGCCTAGGCTGTTTGGTTCTTGTGTTAAATCCAATTCGTTGCCTAAAAACTATGCCGCCCCTTCCATGTCTTCTG
ACGCTGCGGAGGATCCTCTTCCGTGTGATTCAATCACTGGTGTTGTGGAGGAACATGACTCTCCAAGGAGGTCGAGCTCATCTCCTGTGGATAT
AATCTCCAGCCAGGCTTATTCTCGCTCGCTCTCTGCACGTGAGATGGCACTCTCCGAGGACTATACCTGTATCATTTCTCATGGGCCAAACCCG
AAAACAACTCATATATTTGGTGACTGCATCCTGGATTGTGACCCCAAAGAGTTGGGAAGCAAGGATGAAACTGAGAAACCAGAAGGGGATGATG
ATGATTCTTTCACCGACAACCACATTCATATGCACGGCAGGGAGGCATCGTCAGCAGCAGGAGCAGCAGGGAAGGAAAGTGACAAGGGAGGTGT
TGAAGATTGTTTGGAGATATCGCCTGGATCAAGTTACAACGAGGATCTGTTTCCTATGGCCTCTTAACCCCAGGCAAAGCTGTTCTCATTTTCT
TGAGGCTTTTTTGGGAGAGATCATGTGTGAGTTTATTATTAGTGTTGTAAGGTTTTCGTTTTTTTTTGGTGAGATTTTTGCAGGCGTGCTCTGA
ATAAAAGCTTGTTGTTGATCCAAGGGGGGTTGAGTTTTGGTGTGGCCTGATGCCCCCGGCTCATCCTTTCTTTTGTTTGTACTACCATTGTATT
TGTGACTTTATTATCATATTTGAAGGGGAACCAT |
Primers for UN24106 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTACGTATTCTCTCTCTTTGCTTC |
59.558 |
26 |
ACGACTATATTGGGGCCCTT |
59.688 |
20 |
138 |
30 |
167 |
| 2 |
TTCTTGTACGTATTCTCTCTCTTTGC |
59.558 |
26 |
ACGACTATATTGGGGCCCTT |
59.688 |
20 |
141 |
27 |
167 |
| 3 |
TTGTACGTATTCTCTCTCTTTGCTTC |
59.558 |
26 |
TATTGGGGCCCTTCTTCTTC |
60.391 |
20 |
131 |
30 |
160 |
|
|
