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Simple sequence repeat (SSR)
>UN24106
GTAGAGGGAAAATCAGTTTTATACTCTTCTTGTACGTATTCTCTCTCTTTGCTTCTTAAAAATCACACAGTAGAAGAAAGAAAGAATAATAATA
ATAATAAGGGGGGAGAGAGAGAAGAAGAAGATAACGACGAGGAGAAGAAGAAGAAGGGCCCCAATATAGTCGTCTCCGCCCCTGATTCTTTCTT
CAACTTGATATTTCATTCAACTCGTATTAAAAAAGATAGAACCACCTGCATTTGGCTTTCCTGGACCAGTTGATCGAACAATCATGGAATGAAT
GACTTGCTGTAGTAAATCATCCACACAAATCTCATCAGCTTAATAAATTTTTTATTTTGGAATGGCTGAGGCTGATCCAGACTCCTCAGATACG
TCTGATCTCAAACCCATTACCAGCAGCGCCCCGCTCTTTAGCATCCCTCGCTTTTTTGTGGCTAAAGACTCTGATGCAGTAGGGAGGAGCCCTA
CTTCTCCCCTTGATTTTTCACTCTTCGGTGGCCTCTTTAGCCCCAGGTCTCCTCCAGCTGCTGCTGCTGCTCCCTCATCTCCCAGGTTTCGTAA
CAGATGGGCTTTTGACAAAGTCGGCCTCTCTCTTCTAAGCTCCAGCGTTGGAGAAGAAGAAGGGGGGCATGAGGAGGGTTTATTCAACAACATC
GTGCTTGCCCCTCAAATCAAGCCTAGGCTGTTTGGTTCTTGTGTTAAATCCAATTCGTTGCCTAAAAACTATGCCGCCCCTTCCATGTCTTCTG
ACGCTGCGGAGGATCCTCTTCCGTGTGATTCAATCACTGGTGTTGTGGAGGAACATGACTCTCCAAGGAGGTCGAGCTCATCTCCTGTGGATAT
AATCTCCAGCCAGGCTTATTCTCGCTCGCTCTCTGCACGTGAGATGGCACTCTCCGAGGACTATACCTGTATCATTTCTCATGGGCCAAACCCG
AAAACAACTCATATATTTGGTGACTGCATCCTGGATTGTGACCCCAAAGAGTTGGGAAGCAAGGATGAAACTGAGAAACCAGAAGGGGATGATG
ATGATTCTTTCACCGACAACCACATTCATATGCACGGCAGGGAGGCATCGTCAGCAGCAGGAGCAGCAGGGAAGGAAAGTGACAAGGGAGGTGT
TGAAGATTGTTTGGAGATATCGCCTGGATCAAGTTACAACGAGGATCTGTTTCCTATGGCCTCTTAACCCCAGGCAAAGCTGTTCTCATTTTCT
TGAGGCTTTTTTGGGAGAGATCATGTGTGAGTTTATTATTAGTGTTGTAAGGTTTTCGTTTTTTTTTGGTGAGATTTTTGCAGGCGTGCTCTGA
ATAAAAGCTTGTTGTTGATCCAAGGGGGGTTGAGTTTTGGTGTGGCCTGATGCCCCCGGCTCATCCTTTCTTTTGTTTGTACTACCATTGTATT
TGTGACTTTATTATCATATTTGAAGGGGAACCAT |
Primers for UN24106 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGATGCAGTAGGGAGGAGC |
59.973 |
20 |
CCCCCTTCTTCTTCTCCAAC |
60.045 |
20 |
184 |
447 |
630 |
2 |
AGGCTGATCCAGACTCCTCA |
59.945 |
20 |
CCCCCTTCTTCTTCTCCAAC |
60.045 |
20 |
280 |
351 |
630 |
3 |
GGCTGATCCAGACTCCTCAG |
59.945 |
20 |
CCCCCTTCTTCTTCTCCAAC |
60.045 |
20 |
279 |
352 |
630 |
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