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Simple sequence repeat (SSR)
>UN24129
GGAAACCTAAAATAAAAAGAAACTCAGCCGCCATAGCTTCATCTTTTTTTCCACCGTCAAAGTCTTCAACCACCGTACCGGTAGTCCTCCACCT
CCTTCCGTCGCCGTTGGACATGGTCGTGTATTCATCATCATCTCCATGTGGACGTCGTCTTCCCCATGAAGCCTCATCTCCTCCAGCTTCTTCC
AGATCTACTGGAACTCCGTCTCGTCTTTCTTGAAATCAGAAGATTTCATGGCTGCTCACGACCACGGACCAGTATCTCTGCTCGCAACCTACCA
AAAAAAAAATTAGATTCAACAGAGACAGAGAGAGAGAGAGAGCCGACACAGAGAAACAGAGAGAGAGCGAGACAGAGACAGAGAGAAACTCGAG
TGTACTCACCACTCAGTCTGGCACAGAGAAGGACTCATATCCATTTTAAACAAACTCGAAATCGAGTTTGCCATGCTCTGCAAAAGCGCAAAGG
GGACACAGCCTCACGTGTACTGGTCGATTGAATCTCCGTTCCGTGCAAAAGCGACTAGATCTGTAAAAGAAGAGAGAAAGAATGGAAGAGTAGA
GATAGCTTTTTCACAGTGGAGAGAAAGAGAGTAGGAGAGGAAGAGACGTGAGAGAAGATGAAGAAATTAAAAAAAATTGAAAAAAAAATGTTTA
GTGGTGTCCGTTGGATGATGTTTAATCAATGGTTGTGATCTAATAAGGGGTAATCCTTGCCCTTCTTTTTTGACCAATAAAAAAGAAGTTCAGG
GATTAACACTTATTTTAGTGTTTTTTTATTACTATTTTGTTGTTTAGTTTTAATGCATAATCT |
Primers for UN24129 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGACCAGTATCTCTGCTCGC |
59.981 |
20 |
CGGAGATTCAATCGACCAGT |
60.073 |
20 |
255 |
254 |
508 |
2 |
GGACCAGTATCTCTGCTCGC |
59.981 |
20 |
CCAGTACACGTGAGGCTGTG |
60.371 |
20 |
240 |
254 |
493 |
3 |
GGACCAGTATCTCTGCTCGC |
59.981 |
20 |
CTCTGTGCCAGACTGAGTGG |
59.597 |
20 |
151 |
254 |
404 |
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