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Simple sequence repeat (SSR)
>UN24145
AGGGGGTTCTCTCAAACTCGAACAGAGAGAATCAAGATGCCTTTCTGAGATTTTCTCGGGAAAACACTAAACTCCATCTTAACTCTAGATTGTC
TTCAGGGACAGAGGAGATCTGTGAAGTCAAGATTTGAAGAGAGAGAAAGAGAGAGAGTTAGTTTCGAGTTTGTGGATCAGAAAGGTCACTCTAC
TTCGATCATTTTGGTACACGTGGCGTAATGGGTATGGAGTCATATTGATGATGTACAAGTCCCCGAGTTCGTCTAACATTCTTCTTCTTCTTTT
GTCTCCAATGCCCTTGTCTTGTTTCTGATACTTCAAGAGAGAGAGAGAGAGAGAGAGATCTTCAGATCCGTTCGTTTCTTCTTTTTGCCTTTGG
TCCGTTCAGCTGAACTGAGAGAAAGAGACAGCAGCAAAAATGATGAGAAACAAACCGACAAATATTCCGGCGACTAACGGCGGCAGAGTCTCCG
GTGGCGGTGGCGGCAGGGAGTCAGGCGGTCATGATTGGGAGATGAGACCCGGAGGAATGTTGGTTCAGAAACGGAACCCGGATTCGGATCCTGT
CGGAGCTAAACCGCCGCCGATGATTAGAGTCAGAGTCAAGTACGGTTCGGTCTACCATGAGATCAGTATTAGTTCCCACGCTTCATTTGGGGAG
CTAAAGAAGATGTTGAGTGGACCAACGGGCATACACCATCAAGACCAGAAGCTAATGTATAAAGACAAAGAAAGAGACTCGAAGGCATTTCTTG
ACGTTTCGGGAAGTGAAAGATAAATCCAAGATGGTGCTTATCGAAGACCCGATTAGCCAAGAGAAACGATTCTTGGAGATGAGGAAACTCGCCA
AAACAGAAAAGGCGTCTAAAGCGATTTCCGATATTAGCCTCGAAGTTGATAGGCTCGGAGGACGTGTCTCGGCTTTTGAGATGGTTATTAAAAA
AGGAGGGAAAGTTGCGGAGAAAGATCTTGTAACGGTGATTGAGCTGTTGATGAATGAGTTGATCAAGCTGGATGGGATTGTAGCTGAAGGAGAT
GTGAAGTTACAAAGAAAGATGCAGGTGAAGAGAGTGCAGAACTATGTGGAAGCACTTGATGTTTTGAAGGTGAAGAACTTTATGGCTAATGGGC
AGCAGAAACAGTCTAGTCGTCAGAGACTTGCAACGATTCAAGAACATAGGCAAGAACAGAAACCGATACAATCCCTTATGGATGACATGCCTAT
AAACTACAAACCTAAGAAGCAAGAGATTGTGGAGGAGCCAGGAGCAGGACCAAATCTTATGGATTTTTTTACTAAATGGGAAACATTTGATCAT
CATACCGCGACGACGACGACTCCATTGAGCTCGAATACTGCAAATAATCATGTCATCCCGCCCAGGTTCAATTGGGAATTCTTTGATTAAAGAA
CTCAAATTTGATGAGACCTTTTTTTTCTACTTGTATGCTTAATTCTTGTGTGGAGGTGTTCTTTTTTTTTTCCTTTTTCATCTTCTACTTGTTC
TTCTTTATCATCATCATGATTCTTTTCATGTACTTAGATTCTTGTGGGCGTTGTTGTTGTGCGTTATAAGAAATAAACAGAGACGCTACTACAG
ATAATTTGACC |
Primers for UN24145 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCAATGCCCTTGTCTTGTTT |
59.971 |
20 |
CCGGAATATTTGTCGGTTTG |
60.181 |
20 |
160 |
287 |
446 |
2 |
TTTTGGTACACGTGGCGTAA |
60.029 |
20 |
CCGGAATATTTGTCGGTTTG |
60.181 |
20 |
250 |
197 |
446 |
3 |
TTCTTTTGTCTCCAATGCCC |
60.051 |
20 |
CCGGAATATTTGTCGGTTTG |
60.181 |
20 |
171 |
276 |
446 |
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