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Simple sequence repeat (SSR)
>UN24217
GGGAGAGACAAAGAAATATCATCTCAGAGCTTCTTCTAGGGCTTCTACGCGACAACGGCTGCCAACTACTTCAGTTTCATAACTGAACAGGAAT
CATGAAGCCAGTCTTCTGTGGGAACTTTGAGTATGATGCGCGTGAGGGCGATCTTGAAAGACTATTCAGGAAGTACGGAAGGGTTGAGAGGGTT
GATATGAAAGCTGGGTTTGCCTTCGTGTACATGGAAGATGAGAGGGATGCTGAGGATGCTATCCGAGCCCTTGACCGCATTGAATTTGGGCGCA
AGGGACGCAGACTCCGTGTTGAGTGGACAAAGGGTGAGCGTGGAGGCGATAGAAGATCTGGTGGTGGTGGTGGTGGTTCAAGGAGATCCTCATC
CTTGAGGCCTTCCAAGACTCTGTTTGTGATCAACTTTGATGCGGATAATACTAGGACCCGGGGTCTGGAGAGGCACTTTGAACCATATGGCAAA
ATTGTAAACGTTAGGATCAGGAGGAACTTTGCATTTATCCAGTACGAGGAGCAAGAGGATGCAACCAGAGCACTTGATGCTACAAACAACAGTA
AGCTGATGGATAAGGTGATCTCGGTGGAGTATGCAATGAAAGATGATGATGCAAGAGGGAACGGCCACAGTCCCGAAAGACGCCGTGATAGGTC
ACCTGAAAGGAGAAGGAGATCACCTAGTCCTTACAAGAGAGAGAGAGGGAGCCCTGATTATGGTCGAGGGGGTAGTCCTGTTGCTGCATACAAA
AGGGAAAGGACTAGTCCTGACTATGGCAGAAGACGTAGCCCAAGTCCTTACAAGAGAACAAGGCGTAGTAGTCCGGAGTATGGTCGCGACCACC
GCCACAGAGGCAATGAGAGCCCCCGGAGGAGGGAGAGAGCTGCAAGCCCCAGGTACAGTCGCAGTCCTGACAACAAGAGAGAGAGGGTGAGCCC
TGATCGCAGCCCGTTTAAGAAGGAAGGTTTGAAGAATGGAGATGGTGAAGTTGATAGCCCAAGGAGGGAGAGATCGAGGTCTAGCCCTGAGAAT
GGGCAAGTTGAAAGCCCTGGCTCTATAGGGAGAAGGGACAGTGATGGTGGCTACGATGGTGCAGATAGCCCCCCTATGCAGAAGAGCCGGTCTC
GTTCGCCTCCAGCTGAAGAGTGAATTGGAAAGGGGATACATCAAAAGTAGGATGATGTAGTCAAACACTATGTGTCATGTGTTGTGTTTAGTTT
CTTTGCTATTTGAAACATTCGAACTGGGATCTCTTTTATTGTCGGATTGAAAAACTCTTCTCTTGTGTGCTTAAAATGTGCCATGTTACTGAAT
TATTCGTTTTTAAATCGCATCTCACTTGAATTCCG |
Primers for UN24217 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCAGTACGAGGAGCAAGAGG |
60.005 |
20 |
ATGCAGCAACAGGACTACCC |
60.142 |
20 |
239 |
509 |
747 |
2 |
GATGCAACCAGAGCACTTGA |
59.992 |
20 |
ATGCAGCAACAGGACTACCC |
60.142 |
20 |
220 |
528 |
747 |
3 |
CCAGTACGAGGAGCAAGAGG |
60.005 |
20 |
TACCCCCTCGACCATAATCA |
60.148 |
20 |
224 |
509 |
732 |
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