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Simple sequence repeat (SSR)
>UN24311
AATACAGAGCGAGTAGTCGAACTCCCGAGTCACGCGGCGAGTTTATCTCCTCCTCTCACACTCACTCTTTATTATCTCAATAAATAAATCTCTG
CTCTTTCTCTCATTACTCTCTCTCTCTCTCGTTTCTCTTTGCTCTTCTACAGATCTCGGATCCATCTCTACTTCTTAACAGAAATGGAAACTTT
TCTATTCACATCTGAATCAGTCAACGAGGGCCATCCCGACAAGCTCTGCGACCAAGTCTCCGACGCCATCCTCGACGCATGCCTCGAACAAGAC
CCCGAAAGCAAAGTAGCATGCGAGACATGCACCAAGACCAACATGGTCATGGTCTTCGGCGAGATCACGACCTCCGCTAAAGTAGACTACGAAA
AAATCGTCAGAGCCACCTGCAGAGAGATCGGTTTCATCTCCGCCGACGTCGGCCTCGACGCCGATAAATGCAACGTCCTCGTCAACATCGAGCA
GCAGAGCCCCGACATCGCTCAGGGAGTCCACGGTCATCTCACCAAGAAGCCTGAAGACATCGGAGCCGGTGACCAGGGACATATGTTCGGTTAC
GCTACGGACGAGACTCCCGAGCTTATGCCGTTGACTCACGTTCTCGCGACCAAGCTCGGTGCTAAGCTTACCGAGGTGAGGAAGAACAAGACTT
GCCCCTGGCTGAGACCTGATGGTAAGACGCAGGTCACCGTCGAGTACAAGAACGATGGTGGTGCCATGATTCCTATTCGTGTCCACACGGTTCT
CATCTCGACTCAGCACGATGAGACTGTGACCAACGACGAGATCGCTAAGGACTTGAAGCAGCACGTGATCAAGCCGGTGATTCCCGCTAAGTAT
CTTGATGACAAGACCATCTTCCACCTTAACCCGTCTGGTCGGTTTGTCATCGGAGGGCCTCACGGTGATGCTGGACTCACCGGGAGGAAGATCA
TCATCGACACTTACGGTGGTTGGGGTGCTCACGGTGGAGGTGCTTTCTCCGGGAAAGACCCGACCAAGGTTGATAGAAGCGGTGCTTACATTGT
TAGGCAGGCTGCGAAGAGTGTGGTTGCAGCGGGGCTAGCGCGCCGCTGCATTGTTCAGGTGTCTTACGCTATCGGTGTGCCTGAGCCGCTCTCG
GTGTTTGTTGACACGTACAAGACTGGGACTATCCCGGATAAGGATATCCTTGTGTTGATCAAGGAGGCTTTTGACTTCAGGCCCGGGATGATGG
CTATTAACCTTGACTTGAAGAGAGGAGGTAACTTCAGGTTCCAGAAAACGGCGGCGTATGGTCATTTTGGGCGTGAAGACCCTGATTTCACTTG
GGAGGTGATTAAGCCACTCAAGCCTAAGGCCTAGACAAGACAAAAAGGTGGCAATAGCGAGAACTGAGGAGTTGAGACACTCTCTCTCTCCCAC
TACTACTGGGAACTTATCATTAGACTATTATTATTGCAAAAGATTTGAATAATCCCATACTTTCACATTTTGTTTTTTTTTTGCTGTCACTGGA
GAGTTCGAACACAAGGCCTCATTGGTGTTGAACTTTGACTTCAATGTTCTTATTTCCTGTTTTTTTTCTTCTTAACCTCTTGTATTGTAATTTT
GATTGTCAAGAAATGCATCGTTGTGGTGTTAAAATATT |
Primers for UN24311 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGCGAGTTTATCTCCTCCT |
60.723 |
20 |
TGTCTCGCATGCTACTTTGC |
60.165 |
20 |
275 |
35 |
309 |
| 2 |
CGGCGAGTTTATCTCCTCCT |
60.723 |
20 |
GAGACTTGGTCGCAGAGCTT |
59.751 |
20 |
214 |
35 |
248 |
| 3 |
GAGCGAGTAGTCGAACTCCC |
59.043 |
20 |
GAGACTTGGTCGCAGAGCTT |
59.751 |
20 |
242 |
7 |
248 |
|
|
