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Simple sequence repeat (SSR)
>UN25177
CGTGTCACAGAGTGGCGAATCACGCGACGAGTTCGACCCCTTCGCCTCTTCTTCTTCTTCATGTGTGTTGTTTACCCTTCAGTTTTAAAACCTC
TCTCTCTCCTTTACCAATACCATCTCTATTTATTCTCTCTCTCTCTTCTTTAAGGTTTGATCAGAGAGACTCTGAGGAGAGAATTATTAGAGAA
GAGTTTGGTTTGGTTTGGTTTGTTCTTTGGTTATTTCGAGGAGTGATATACCGTTATGAATGACTTTACATAAATTCTTGTGATTTTACTCTTT
TATTTTTTTCTGGGTTTCTTTTGACCTCTTTTGTTTTTTAATTTTCTCAAAAGCTTTGATTATTCTTCCGTCTTCTAAAGAAGAAGGATGAAGA
ACGAGGAACAGTCAAGATCTCTGTTTGGAATCTCTCTGTCTGATCGACCAACATGGCAACAGTTTCTCATCTGCACTTCTGGTTTCTTCTTTGG
TTACCTCGTCAACGGAGTTTGCGAGGAATATGTTTATAATCGCCTGCAATTTAGCTTTGGTTGGTACTTCACGTTTATACAAGGATTTGTCTAC
TTGTTCCTGATCTACCTTCAGGGGTTCACCACAAAGCATATTGTGAATCCTATGAGAACATATGTCAAACTATCTGCTGTTCTCATGGGATCAC
ATGGTTTAACCAAAGGCTCTTTGGCTTATCTCAATTATCCTGCTCAAATCATGTTCAAATCCACTAAGGTGTTGCCTGTGATGATAATGGGAGC
TTTCATACCCGGTCTGAGGAGAAAATACCCGGTCCACGAATACATTTCAGCCTTCTTGCTGGTTCTTGGTTTGATACTATTCACATTAGCAGAC
GCACAAATGTCTCCAAACTTCAGTATGATTGGGATTTTGATGATTACTGGTGCATTGATCATGGATGCTTTCTTGGGTAATCTTCAAGAAGCCA
TTTTCACAATGAACCCCGAGACAACTCAGATGGAGATGCTTTTCTGCTCAACGGTTGTTGGACTACCGTTCTTGTTTGTTCCCATGGTCTTAAC
CGGAGAGCTTTTCCGTGCTTGGACTGCGTGCTGGCAACATCCGTATGTGTACGGTGTGCTTGTATTCGAAGCTATGGCCACATTTATCGGTCAA
GTCTCGGTTCTATCTCTTATTGCCCTATTTGGAGCCGCTACAACCGCCTTGATAACAACGGCTAGGAAAGGAGTTACGTTGTTGCTGTCGTATT
TGATATTCACCAAGCCATTGACTGAGCAGCACGGGTCAGGATCGCTGTTGATAGCAATGGGAATTGTGTTGAAGATGGTTCCGATGGATAGTAA
ACCTCCTAGCAAGATTCCGGCGAGACAAGCGGTTAGGAACGGTGGAGGTGAGGGTGATAGAGATGAGGATGAAGAGAGGAAGTCATTGGTTTAA
TAAATGTTGCCATGTATCTATCTTCTATATATACATTTTATTTCAGAAGTTTTAAAGGATTTATAGACAAGAAAGAAACACAAAAGATGGGGAT
GAAGGCAAATAGGATAATAAAAAAATGTTTTCTAT |
Primers for UN25177 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCTTCGCCTCTTCTTCTTC |
60.455 |
20 |
CCAAAGAACAAACCAAACCAA |
59.862 |
21 |
181 |
38 |
218 |
2 |
CCCTTCGCCTCTTCTTCTTC |
60.455 |
20 |
GAACAAACCAAACCAAACCAA |
59.733 |
21 |
176 |
38 |
213 |
3 |
GTCACAGAGTGGCGAATCAC |
59.266 |
20 |
CCAAAGAACAAACCAAACCAA |
59.862 |
21 |
215 |
4 |
218 |
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