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Simple sequence repeat (SSR)
>UN25197
GGAATCTAGAAAACCACATTTCAACAGAAAGACTCCCATTCGCTAAGCAATCAATTTCGAGATTTTAATAAAGTCTTTTTTGTCTTTTAATTCC
AGTCACCAACCCTGGCTTTCATCTCTCTCTCCGGTAACAAGAACCGTCGGAAAAGAAAATACCGGACCATGGAGAGTGAGGCTTGGAAGGCACA
CGTGGCCATGGTCTGCGTTCGATTGTTCAACGGAGGTTATCACGTGATCACCAAAGTAGCTCTCAACGTCGGGGTGAACCAACTCGTCTTCTGC
GTCTTTCGTGATCTCATTGCTCTTTCCATTCTCGCTCCTCTTGCTTATATCCGTGACAAGAAGACAAGACCTCCTTTGAACCGACGCTTTCTCT
TAGCTTTCTTCTTCCTCGTCTTAACTGGGATATTTGGGAACCAGCTTTTGTTCCTCGTTGGTCTCAATTACACCAATCCCACTTATGCTGCAGC
CATTCAGCCCTCTATTCCCGTTTTTACTTTCATCTTGGCTCTCATTATGGGAACAGAGAGATTGAATTTATTCAAACTAGAAGGTCAAGCTAAG
GTAGGAGGTACGCTGGTCTGTGTCTCTGGGGCCGTGTTGATGGTTTTGTTTCGTGGACCGGCTTTGTTTGGGGAAACAGAGCCTGACTTCTTGG
GTCATGGTGAGATAAGACACCCTGAAGCATCTGGATCTGGACACTTGGTGTCTAGCTTTCTCAATGGACTTGGGAGATGGAATCTGGGAGTTTT
GTGCTTGATTGGGAACTGCACTTGCATGGCTGCTTTTCTTGCTATTCAGGCTCCAGTTTTGAAGAAGTATCCGGCAAATCTTTCAGTTACAGCG
TACTCGTATTTCTTTGGGACCATGTTCATGGTGACATCTGCTTTTTTCATGACTAATGAGTCAACCAACTGGAGTCTCACAAGATCCGAGTTTT
TTGCAGTTGTCTATGCAGGAGTAATCGCATCTGCCCTTAACTATGGTCTCTTGACGTGGTCAAATAAGATTTTGGGTCCTTCCTTGGTTGCTCT
GTATAACCCTCTTCAACCTGGAGCCTCAGCCTTCTTGTCCAGAATCTTCCTAGGAAGCCCTATCTACTTGGGGAGCATTTTAGGCGGGTGTGCA
ATCATCGCAGGTCTTTACAGTGTCACTTGGGCGTTTTACAAGGAAAAGAAAGCAGCAGCAGCAGCAACAGGTACCATCCCGATCACCTCAAAGG
AAGCTGAACCCTTGATCTACAAAGACCACAAGAACAAACCAATGGGACATCTATTCACAAACATTCCCATCTCTTCACCAAAATCTGCTGATTG
AACCAAATGTCAGGCTTCTTGAAATCGGGCCTGTGATGTTTTCTTCATCTTCTTTTGCGGTACTAGTGACTATTAAACACATCAATATTTACAT
GCCTTAAACAAATCATAGAATTTAAGAGCTTTCATCCC |
Primers for UN25197 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCCCTATCTACTTGGGGAGC |
60.06 |
20 |
CAAGGGTTCAGCTTCCTTTG |
59.846 |
20 |
146 |
1091 |
1236 |
2 |
GCCCTATCTACTTGGGGAGC |
60.06 |
20 |
CCGATTTCAAGAAGCCTGAC |
59.813 |
20 |
254 |
1091 |
1344 |
3 |
CTTGGGCGTTTTACAAGGAA |
60.103 |
20 |
CCGATTTCAAGAAGCCTGAC |
59.813 |
20 |
191 |
1154 |
1344 |
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