|
Simple sequence repeat (SSR)
>UN25238
GATTACAGCCATAGTGTTCTTATAGGCAAAGTTCAATGCCAAAGAGCAAGGATGGCATACCGGGTGATTATTTTAGTGGTGGTAGAACCGGATA
ACGGAAAGCTTAAAAGTTGCAGGAATCAATAAATTTAAGGGAATGATTGTAGCTAGTGACCTGAATTTACTTGTATATCACAGGAAATAACCGC
TTTAACATTAAAAGTTTACTCTCTCTTGAGTTATTTAGAGAAGGACTTGTTTCTCCAGGTCTTAAAGCCACAAGAGGTAATAACTTCTAGAGAC
CCCATTGGTTAATAAATGCTCATCCATGTGAGAGAGCCGGGAAAAAAGGGGATTCCATTTCATTTTCTTGTTGTGTGTCTTTCTCTATATATCA
TCCTTCATCACTCAAGATATGCTTCACTTGTTAACATTCCTACAAACTGTAGCCAAGAAGACCATTCATTCCTTTTGTGCTATGATGATCATGT
GAGATGAATGAGATATCTCTTACTAGCTTATTCTTTGTTCTGTAATAAGATTTAGAAAGAAAAGATGGGTAGATCACCGTGCTGTGACAAGATG
GGTTTGAAGAAAGGACCATGGACATCAGAAGAAGATCAGAAACTTTTGGCTTATATTGAAGAACATGGGCATGGAAGTTGGCGTTCACTGCCTG
AGAAAGCTGGTCTCCATAGATGCGGCAAAAGTTGTAGACTCAGATGGACTAACTACCTAAGACCAGACATCAAAAGAGGCAAATTCAACTTGCA
AGAAGAACAAACCATTATTCAACTCCACGCTCTCTTAGGAAACAGGTGGTCGGCGATAGCGACTCATTTGCCAAAGAGAACAGACAACGAGATA
AAGAACTACTGGAACACGCACTTGAAGAAACGGTTAGTTAAAATGGGGATAGATCCAGTGACTCATAAACCCAAAAACGAGACTCCTCTGTCTT
CTTCTCTTGGTGGTTTATCAAAGAACGCAGCCACACTTAGCCACATGGCTCAATGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGCTAGCTAG
AGAGTCAAAGCTTCTTCTTTACCAAACCAAAGTATCATCATCATCATCATCTTCTCATCATCATCAGCAGCAGCTTGAATCTCCGACATCTACA
GTGTCATTCTCGGAAGCGAAGACAGAGTTCGTCGGATCATCATCATCATCAACGTGTCTAAATATGATCAAAGAAGCTGAAAACGATTGGATCA
GTTCAACGATTCACGAGTTCCAAGGAGTCGAAGAAGGGCTCACGGGTCTCTTGCTAGGTGGCGGTGATTCGCTTGGCCGGAGTTTCTCAACCGA
TAAAAATGAGACTGCTGGCGAGACTAGTGGTGACTGTAACAACGGTTACTATGAGGACAACAAGAACTATTTGGACAGCATTTTCAGCTTTGTG
GATCCTTCGCCGTCCGATTCAGCTCCTTTGTTTTGAATCAAGGGCTGATATCTCTCTAGAGGAATGTTTTGGATTCTTTTTTTCTTTTGTCAAC
GAATGTTTTGGATTCTTTTAGTTCTTAATTTGTGGGATGTGTAAACTCTCTGATTAGATAAAAAAGTTTTTTAATCTGTTTTTTTTT |
Primers for UN25238 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGCTTGAAGCTGAAGCAAG |
59.898 |
20 |
CCTAGCAAGAGACCCGTGAG |
60.005 |
20 |
275 |
1006 |
1280 |
2 |
CTTGAAGCTGAAGCAAGGCT |
59.898 |
20 |
CCTAGCAAGAGACCCGTGAG |
60.005 |
20 |
272 |
1009 |
1280 |
3 |
AGGCTTGAAGCTGAAGCAAG |
59.898 |
20 |
GAGCCCTTCTTCGACTCCTT |
59.957 |
20 |
258 |
1006 |
1263 |
|
|