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Simple sequence repeat (SSR)
>UN00283
GATACATACTCATTTATGATATTTAGAAATCGACTGACTAGAAATGAGATTTTTTTTCTGGCACATGACTAGAAATGGAGATTCGGAGGTAATA
AACTAATAACAAATGATTTAAGACCCAATAAAATATCCGAAAAAGAGCCAATCACTCTTGCTTTTTGGACAGAACAAAATTAATAAAATATTCC
ATTTTCACATGATAGCACCGACGACGACAGCGCAGGCCAGCGAAGCAACGACGGTGGAGAATTGCAGCGACGAAGAAGAAGATTTCTGAGAGAG
TGGGATAGATCCAAATGCGTTTTGGTAAGAGGGAGCATCGGCATCGGCAGAAGAAGAAGGAGACAAGGCGTCTGCTTCGGCGGAGTAAGTGCCG
ACGGAGACAATGAGCTTCTGGTACTTTAGACAGTGGCCAGGCTGTCCGCTGGTGAAGTAAAAGGTTCCGTTTTGGGTGAGGTTGAAGAGAGAGT
TGCCGTCGTTCATGTACAAGATTGGATCTTTGGTGTTGCAGCTCTTGAAGTTGGAAGGTGTCACTTGAATCATTGAATCTTCGCTTGGTGGGTA
CAAGAACAAGAGGGAGTCACCGATCTTGAAAGAGTGAGATTTGGGCCATTTGGAGTAGACTTTAGCATCAACCGGGATACCCCATGAGTCCAAG
TTCCCGACTTTGTACTGCGTCGAAGATACTTGCACTAACAGTATCATCACCAAAACCATTACGCTGCTCAAACTCATCATTCCCATCTCTCTCT
CTCTCTCCCCTCCTGTCTTGATTCCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTTTAGCGAAGATGATCTCATAGTTTTAGCTGCTGGAAG
AGAACCAAGTCCCAGACAGTCACTGCTAACTCCGAGATCCGGAACACAGCATGGCCTACCATTCCCAGATGGCTTGGACCCATTTGCGCCTTCT
GACAAGTGAGGGGTGGCATATTTTTCACAAGACGACACAACAGTTCGCTTGGCTGGCCTTTTGTCCTGATGCTGGCAACAAGATTCTATGCTCC
TACTAGAGCATGGCATAGACACAGTGTTGCTTAATGTTTTAACAGGGCATAAACCATTCCCGTTAGGAGACAAGCATTCCCCGGCTTTGCGTCC
TTTGCATGCCCACCCAGAGAAAAGAGTAACGAGAGCAGCATCCGATTTAGGTGCTGAGGCCACAACCCAACCATTTAATCATGAAAAATTGTGC
GTAGCTGATAAATTTCTAAAGAGGTTAAGTTTCACTAAAAAAGGAAACAAAGATTGTACCTCCAGCTTGTAAGTTCTTCAGAAAATTCTTAGCT
TCATCTTCTGTTAAAGATGCCGCCAGCCATGGCAAAACACGTTCAATTAATCTCAGCATTATACACAGGCTTTGGTAGAGAAGTTCTTGTTGAC
GTTTAAAGGTGAAGTTCTTGCGTGCAAGGGGTAGCACCTGGAAACATTATGAAGTTAGCT |
Primers for UN00283 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGAGTCACCGATCTTGAAA |
60.05 |
20 |
CTTGGTTCTCTTCCAGCAGC |
60.134 |
20 |
280 |
576 |
855 |
| 2 |
AGTGAGATTTGGGCCATTTG |
59.933 |
20 |
CTTGGTTCTCTTCCAGCAGC |
60.134 |
20 |
259 |
597 |
855 |
| 3 |
TTGGGCCATTTGGAGTAGAC |
59.933 |
20 |
CTTGGTTCTCTTCCAGCAGC |
60.134 |
20 |
251 |
605 |
855 |
|
|
