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Simple sequence repeat (SSR)
>UN25347
TTGATAAGTCTTGCATTGATAAGTCTTACAACACGTTAATCTAATACAAACACACACACACACGAAAGAGTGTTTTCATAAAAGAAGAATACAC
AAACGATCATGAAGAAGAGAGACCATCAAAATAGGTCTCCCCTTTTCTCGAACCCATTCGCTTGTATAGTATGATATAACTAAATCTAATCAAT
CAAGACCACACTGAATCTCTTCTGCTTAAGGATATTATATCAGTTTCTGCTCACCATGCAGAGATGAGAGAGCTAGAAAAAAGCTTTTTTTTTT
TAAAGTTACAATCAGAACCCATTAGAAGAAATGAAATGGGTTTTTCTCACTTCTGCGCCACAGTCAGCTTAGCTAGTCGCCACAGAATCGGTTC
TTAGACTTACGTTTAAGAGTTGTTGTTCCACATTCTTACCACTACCTGATACAGAGCTGTTGCTGTTGTTATCAACTCGAGATATAAGGTTCTC
TGTTTTCCCAGTTGCTTGCGTTTGCGTCGCTTTCAGTTGAGCCAATAAAGCTTCGTTCTCCAGCCGTAGTTTCTCAGACTCATCGTTTAGTTGG
CCTAGTTTGGACCTCAGAGTCATGTTCTCAGCAACTAGTGCGTCAACCTTGACAGAGAGTTCTTCAGTTTCAGCCTGCTTCCTTAGTCTTGACC
TTCTAGCAGATTCTCGGTTTGACTGTTTTCTCTTCTCTCTTTTAACCTCTTTTTCATTCCAGACTTCATGAGGCGCACCATGGCATGGCTGTGG
GAAATCCATAGCTGTGGGCATAACAGGAGTCCCCACAGTCACTGCAGGTTTATCATTTTCATCTCTAAGAAGAGGAACAATTTGAGATGAAGGT
TTCCCATCATTGTTCGGTGATCCTTCCCGGCTTCTTTTCTTCCTGGACTGTTCTCCCCCAGTTGTATTCCCATCACTACCATTGCTGGAATCAT
CATTCTCGGAGCTCTGAGAATTCCTAGGTCCACTGCTGTGTTCAGCACTCCCAGCTTTGTTATTGCTTATAGACATTGCAAGTCCATCAAATTC
TTTCAACTTTTTCATGAACCCCTGATCCGTGTTTCCAGGCGAGTTAGCTGGAGCTTCCAAGTTCAAAGGAGTTGTTGTAACAACCGGTGTTGCT
TGAGAAACGGGACCTTGTGGTTGTGAGCCCATTTGAAGAGCAGGATGAGCATAGACTCCACCAGGAGGACAAAATGGTGGGTAGGGTGTTCCAT
AAGGAGCCATCATTGGCGAAGGAGAACCCCAGATATAAGGAGGAGGGGGAGCAGGAGCATGACCATTTGAGTTGTAATATTGAGGAGGTATGGC
TACTCTAGGGCCATAGTATGCCTGCATAGCAGCCCAATCATGATGATAAACATGAACATTGCTTTGCTCAGGAGGAGGAGGAGGAGGAGGAGCT
TGTACTTGTTCTGGCTTGTCAGATTGTGTGGACTTTCCTTCTTCGTTGCTCCCCATTGCTCGATGCAGACACTCTGACTACAAAGTATAACTTC
TCTCTCTCTCTCTAACACTCGCAGAATGGTTTCTCTCT |
Primers for UN25347 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAGGGCCATAGTATGCCTGC |
60.081 |
20 |
AGAGAGAAACCATTCTGCGAG |
58.684 |
21 |
221 |
1322 |
1542 |
| 2 |
TAGGGCCATAGTATGCCTGC |
60.081 |
20 |
AGAGAGAAACCATTCTGCGA |
57.61 |
20 |
221 |
1322 |
1542 |
| 3 |
TAGGGCCATAGTATGCCTGC |
60.081 |
20 |
GAGAGAAACCATTCTGCGAG |
57.61 |
20 |
220 |
1322 |
1541 |
|
|
