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Simple sequence repeat (SSR)
>UN25358
GCTACTAGTAAATAATTGATTAAAAACTATATTATGGATAATACATAAGCATCCAACGATCCTTTTTGTTACAAAATAGAAAAACCAAGAAGGC
TGCTTCTCTATTAGTTTATTAAAGAAGCTTCTCTATTAGTTTATTAAAGAATCGCAAATAGCAGATGAAAATAGGGTTCACCACCACGGATAAT
TACCCACTTCCCCTAATCTTAAGACATTTAATTAACATTAATATAACTAATCCAAATAAATCAGAGTTTTTCTGAATTAATCAAATCACTGCTT
GTTGTTTAAGAGAGCTGCTCGTAACTCCGCTGGGTCGATCTCGTTGGAACCGGTTTCCGGTCTGTAATAACCGGTTTTGGGGTCTGGAATCCAA
GCAATCTTCTGGTTCGATTCTTCCACTCCCTTCTTCACTACCGCCGAAACAACGGCTCCACCTTTTCCACCGCTAGACTTACCCCCCGTGGCCG
CATAACCGCGTCGGAAGATTGCATTAGAGAGTTCTTGAGAGACGAAAGCAGATACCATCTTAACGTTAGAGAGAGAACGAGCCATGTTTATCGA
AATATGTGGTTTCTTGAAAGAGAGAGAGAGAGACGGAACAGACAATAAAAGGTTGAAACTTTTGTTGTTGTTTGGGAGGTTTGTTCTTTTTTTT
ATCGCCGCCGCAGAAGGAGAGGTTTATCCGAGGAATAGGAGAATTTGATCTGCGGCGAAGAGGTCGAAAGAAACTTGGTGTCGTCTGTATTCTC
TCTCTCAAACTAAAATGATTTCGAAATGGTTTTGAGGGATGTCC |
Primers for UN25358 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGTTCGATTCTTCCACTCC |
60.05 |
20 |
GAACAAACCTCCCAAACAACA |
59.861 |
21 |
265 |
386 |
650 |
2 |
TTCTTCACTACCGCCGAAAC |
60.249 |
20 |
GAACAAACCTCCCAAACAACA |
59.861 |
21 |
244 |
407 |
650 |
3 |
CACCTTTTCCACCGCTAGAC |
59.734 |
20 |
GAACAAACCTCCCAAACAACA |
59.861 |
21 |
216 |
435 |
650 |
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