 |
Simple sequence repeat (SSR)
>UN25408
ATCATAAGCAAACATCCATTATTTCTCTATTTTCTTGTTTTATCTCAAGAAACCCAACAAAGAGTGAACATAAGTTCCCAAAAGAAACAACATG
AAAGACAACAACAACAACAAAAAAGAAGAACATAGACTTGAGAAGAAACAAAACCAATAGTATATGTTATGTGGATCGAGAAGTAGAGAGAGAG
ACACTATAGTGGTGGTTCTTCCATGGTCAAAATCATCCAGAGAGATTGAAACTTTTTTTAAGCAGCAACGTCTTTGTCCTTGGCGGCGGTATTG
TCTCCTCCTCCTTCGAGCTGGCTCAAATTTCCTTTCTCCTTGATAAGCTGAATATGATGATGCTTGCAATAAAGCTTCCCCTCGTGAGCTATGT
AGTTCGAAGGACTTATCGTGCAGCCTCCGTGTGTACACTTGAAACAGCTCTTGTGGTACAATGTTCCATTCACCGACACCTTCTCAATAGGATA
GAGACAAATAGGAATAACCAAACCACGCCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGCTCCTTCGTCAGATGACCAA
GATATTGCCGAATACCACATATAATCAAAAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCTGTTGCTAAGAAAAAGGTAGAACCATA
AATACTATCCGAAATAGTGAAGGGTGCTTGATAATATTCCATTCCTTGAAAGCCAGTAAATACTAGAGCCAGTAAAACGGTAGCTACTAAAGCA
TAAACTGCTCGTTTTTCCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAAGGAGAATAAGGGTATTAAGAAAAG
GGATTTCCCAAGGATCTAAAACCCCAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGCAGGTGCCAAAGAAGAATGAAAAAAAGCCCA
AAAAAAAGCAAAAAAGAACATAACCTCCGATACGATGAACAGAATAAAACCATATCGAAGTCCTAATTGTACGACTTTGGTATGATGTCCTTCC
AACGTGGATTCACGTAGAACATCGCGCCACCATACGAACATGGTATATAGGAGAAATATGAGGCCCAAACTTAGAAGTCTTGCACCCCCTTGAA
ATGAGTGCATGTACATCACACCTCCTACGGTGGTTGCCAAAGCTCCGAGTGAACCCGAAATAGGCCATGGACTTGGATCTACCAAATGATAAGA
ATGCCTCTGAGATTCAATCATAAACCACTTTGTCTCGGTTGTATGTAAACCCCCACCCTTCACCCCCCAACGGGCTCTTTCTCTTTGGGGTCTA
ATTTTCTTTCTATCTGACAGGACAAACTAATAGGAAGGGATGGTTCTTTCATTGCATTGATAGAAGTCTAACTAGAAAAGGATCTCTCTATTAC
TTTGAGAAGAGAATCGTTGGTTTGACCGACGGAAAGCATGGGAGAAAGAAAGATGCACAAATAGACGAAAAGAAAGAAGAGAATGAGTCACAAG
ATAAAATGAAAATGAGTTCTCACTCTTATCATTTTCATAACACTGATTGACGATGGCCCGAATCCGAATCTCACCTCAGATGTTCATCTGGCCC
TCGTTCTCATTCTTTGTGTTATCACGGGCCCGCTTTAAGAACTTCTTTTTATTTATAAAATCGGTAATCTCCCCATTGGGGTCGTTTTCCCTTC
TGGTCTGGCCTTCTCATTGTTCCCAATTCGGTTTATTAGCTCTTCCACACATTACCGGTGGCGAAGGCACTCCCCTTATGGGCGGAAATTGCAG
CCCCTCTTTCGCTTGGTCAATTAGGGAGCCAATCAGTTCGGCTAACTCCATTTTGATCTTTCTTACTTCTTCATATTTTTTTTTAGATGAAATT
ATTCCTGTTGTTCTGGGCAGGTCGAGACGCGGTCGCTTCGAAGAGCTGGCACCGCTTCCATCGCCTCCGACGGAATGAGAACAGCCATCCATAA
AAGACATGAAAAAAGAATATAATGGTACAACAATGAAAGCGGCTGCCCAAGTCAGGCTCAACTCCATAAAGGGGCGCTTCATCAACAAGAGAAG
GATATTTAGAAAGGCTAGCATAAG |
Primers for UN25408 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCCCAAAAGAAACAACATGAA |
59.469 |
22 |
AGCTCGAAGGAGGAGGAGAC |
60.096 |
20 |
227 |
75 |
301 |
| 2 |
TTCCCAAAAGAAACAACATGAA |
59.469 |
22 |
GACCATGGAAGAACCACCAC |
60.223 |
20 |
142 |
75 |
216 |
| 3 |
TTCCCAAAAGAAACAACATGAA |
59.469 |
22 |
CCAAGGACAAAGACGTTGCT |
60.291 |
20 |
197 |
75 |
271 |
|
|
