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Simple sequence repeat (SSR)
>UN25449
GGAAAACAAAAAAAAACAAAAGACAACCCTAGATTGTTCTATCGCCTTCCTGTCCCAGGTTTATTTCTCTCTCTCTCTCTATCTCCCCCGCCCG
CGAAAAACGAATCCGAATCTCGTAAAAACGAAAGAAGCATCTTTCCGAATCTCTCAATCTATCAATTAATCAGCTTCAATGGCAGGGAGAATCA
TTGCGCAATTGATTGTGATGGGTTCTGGGATATTGGGTCGTGCTTTCTTTCAAGCCTATCGTCAGGCTCTTGCAAATGCTTCTAAAACTGGCGT
AGCGCAGGAAGCAATGCAGAACGCAGTACGTAAAGCAGGAAAATCCATTACTGAGCAAGAGGCTAGGCAGATTCTCGGTGTCACCGAGCAGACC
TCTTGGGAAGAGATAGTACAGAAATACGATAAGCTGTTTGAGAACAACGCCAAAGCTGGGAGCTTTTACCTTCAATCGAAAGTTCATCGAGCCA
GAGAATGTCTTGAAGAGGTGTACAGGAGCAAAGCCAACGGTACACCTAGTTAAAGACTTTTTTATCTTTAAATGTTTTTTTCTCTTTACAGAAT
TACATTTCTTGCTCATTATGTAAAATCAAAGACAGTATCACAGTTCTTTGAGATGATGTGTAAAACTTTGAAAGACGGCCATAGCTTTCTTCAC
CCATTGTTTACTAATAACGAAGAGT |
Primers for UN25449 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTATCGCCTTCCTGTCCC |
60.165 |
19 |
GCTTGAAAGAAAGCACGACC |
60 |
20 |
206 |
38 |
243 |
2 |
TCTATCGCCTTCCTGTCCC |
60.165 |
19 |
GGCTTGAAAGAAAGCACGAC |
60 |
20 |
207 |
38 |
244 |
3 |
TCTATCGCCTTCCTGTCCC |
60.165 |
19 |
AGCCTGACGATAGGCTTGAA |
59.978 |
20 |
219 |
38 |
256 |
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