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Simple sequence repeat (SSR)
>UN25486
GGATAGAAACTCATCTAAGTGAAATCATGATATGTGGTCTTTATGACAAGGCAGATCACGCTTCTTCCTTCTTCTTCTCGTCTTTCTTGTCTCT
AAGCTAATACTTGAGAGAATTTTTAGAATGGCGACTTCTTCGATCACTATACCAACCATTCGGGGCACCAAGTTTCTCGGCCAGACACATATAT
TTTCAACTCCAAACCGATCGGTTCTCCCGCCTTCAAAACAGCAATCAAACGTTCATCGAGTAAAGGCCATGGCTAAGTTCAACCTATGGGAGGT
GATGGGAGGACGAGGGCTATGCAACGGAGAGAAAGGTATCGAGAAGGAGCTCCAGAGGAACATAGAGGAAGATACATCAAAGACTGAGAAACAG
ACAAAGAAAGAGAGTGGAGACGATAGCTTGTCGTTTCAAGTTCCTGAAGACGGTTTCGAGAAACAGATGATGGGTCTCACCGGAGGCTTCCCCG
GCGGAGAGAAGGGACTGAAAACGTTCATTGAACAAAACCCACCACCACCACCACAACCGAAGAGAGGAGGCAGCGATGATGTTGTGTCCACAAT
TGCTACAGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGCCGGGGATGATCGCTATAGTCAAGAACGCGAACAGTCCTTACCACATG
TACTGCGGGATAGTGCAGAGGATCACGGACGGGAAAGCTGGCGTCCTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAAG
AGCTTGAAAGGAGAGAGAAAGGACCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATCGAACAGATGCAAAAGGAGGCAGCATC
ATAAGTTGGATCTCTTTCTCTACTCTTCTTTGCTTTCACTGTTAAAATGTGTTGTATGTAACGTTTACCTTCAAGGTTTCTGACTGGTTTCTAG
AAAAAGCTTCAGCATGTAATATAAAAATCAATAAATTCCAAACCATAAGGCATTAATAGGGAGTAAAAATGCACTCAATCAGTGTATATAAGTA
AAAAGGTTTTAAGACTAGCAAATTGAGTCTGTTTCTTTATTGTGTCAAAATGACATCAACCGAATCTTAAGTCGTGAGTATATTCTGTGAATCG
CGAAGAAAGAGAAGAGGTCCACCATCTCTATGATCAAATGCAGCCTCCCAACAAAATGGCTTCCATCTCTTCGTTAGAAACAGGGGTGCGCTTG
GGCTGCAACGACGCCTTCCCGCCGATAGTCTTTGGGGTGTTCAGGTTGGAGAAGAAGAATGTATCTACTGCTTCATTTTCCACCTGTTTCGTTC
CCTCTGAAGGTTTGAGGTGACGCTGAGGGAACTTAATGCGAGGAACCCTCTTCAATCCATGAACCACGTTCATCTCTTCTCCCTTCTCCTTCGT
TCGTTCGTGTCTGTGCTCC |
Primers for UN25486 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGAGAGAAGGGACTGAAAA |
59.401 |
20 |
ACGTTATCAGACGGTCCCAG |
59.989 |
20 |
269 |
472 |
740 |
2 |
CGGAGAGAAGGGACTGAAAA |
59.401 |
20 |
CGTTATCAGACGGTCCCAGT |
59.989 |
20 |
268 |
472 |
739 |
3 |
CGGAGAGAAGGGACTGAAAA |
59.401 |
20 |
TATCAGACGGTCCCAGTTCC |
59.927 |
20 |
265 |
472 |
736 |
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