 |
Simple sequence repeat (SSR)
>UN25518
CTGCAACAAAAATATAATCTAAAAGATCCAATCCTTCTTCTTCTTTTTTCTTTTCTTGTCAGAGAAAACAATCAAAAGATGGGTAACAGTTTAG
GCGGCAAGAAAACGACCAAAGTCATGAAAATAGACGGCGAGACTTTTAAACTGAAAACTCCAGTGACCGCGGAAGAAGTCTTGAAAGACTTTCC
CGGCCACGTTTTGTTAGAGTCCGAATCCGTCAAGCACTACGGTGCTCGAGCCAAACCACTTGAGATGAAGCAAAGGTTGGAGGCGAAGCGGCTC
TACTTCGTGGTGGAACCGGTGAAGGAGTGTCCAACGAGAAGGGTAAGGTCGGGAATACACATGAGTGCAAAGGAGAGGCTTGAGAATCTCATGC
TTGCGCGTAGATCATCTTCCGATCTTTGCATACTCAAACCGGCGGGAGAATGGTCAAAGACGGAGGAAGGAGGAGGAGGAGGAGCGGTGAGGGT
GAAGCTGAGGATTCCAAAGGCGGAGCTGGAAAGACTCGTTAAAGAGGGAGCCACGGAGGCGGAGGCTACTCAGAAGATTGCCGCTCTCTATATG
GCCAAACACAGCCATAACGAAGGGGCTCGGAACACGCTACAAGGTCGTGAGGGTGGAGGAGACGAGCCTACCGCCGCCATCGCTACAGCCACAT
CCCTCGCAACGAGGGGAGTCAAGTCACGTCTGAAGCGAGTGAGTTTCATGGCGGAAAGAGGAGGAAGCGAGATTACCGTTGCTTGAAGATGATG
AACGATTAAATACATATATGTAATGCATAGACTGCTCCTCAAAGTTTCTGCATCTCGTTGTACATAAAGAGCAGAGTTTTGAGAGAGAGCGAGC
TAATGAGTAGTTCATACATGTCTCCGCTATGCAGCTAGAGTTTTTAGTATTATTTATTACAAAAGATAGAACAGTTTTTAGTATTATTTATTAC
AAAAGATAGAACGTTTTACTATTTGTAGTCAGATTCATCACTGTCTCATTTATCTGTTTCTTGGGAAGATAAGAGTAAAGATACTCTGTTTCTC
TATAGCTTCTAGGCTCGTTTTGTCCTTCTTCCGACCTCAAGAGCCAACTCTGTATCAATCTTCAGTGAGATATCCAACGCTTTAACCGAATGAG
TCAGAGCTCCACTGCTAATGAATGTAACTCCACTTTGTCCAATCTTGTGTACTGTCTCAATTGTTACGTTGCCTGAAGCCTCCGTCTCGACTCT
TCCATTGATTAGCTCCACCGCATCTTTAAGCATGGTGACATCAACATCTCCATTCTCCAACGGTACAACCATATTGTCCAGCATTATTCTCGTC
ACCCTACTCTTGGACCCACTTACATACTCTAACACTTCCTTCACTTCCTCCAGCGTCCGTGTCTCCAGTATACGTGCAGGGTACGCTGCATCCG
CCATTAACTTGGTGAGGGTAGCGATACCGCTCATCCTCTGCATAAAGTTGAGCACAACTCTTTCAGCGACACAATCTTATGAGCGTTTCCTGAT
ACTTTCCCAAACTTTAACCCTTTATGAACATAATCTCCATCCTTACGCATCCATTCAACCTTCAAAGAGGGATCAACTTGCTCAAAAATCATCT
CAGCAAGAGCGATCCCAGCAACAATCCCCTCTTCTTTCGCCAAGAAATAAGCTTCCACTTCCATATCAAACGGTATCGTAGCCATACACGTCAC
ATCTCCTGTGTCACCAGCATCTTCGGCTAGGGCTAGCTCGATGACTGCTTTCAAATCGTAAGTAGGATGCGAAGGAGGCTTTATCGCCATGGAA
CCGTGTGAAACTCCTCCTCCGGCCGTTTGAGTCGCAGAAGCAGACATTTTCACGAGGCTCCTTTGAATAGCGTAGAATTGAGGCGACAGCAACC
CC |
Primers for UN25518 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAGAATGGTCAAAGACGGA |
60.05 |
20 |
CCCTTCGTTATGGCTGTGTT |
59.993 |
20 |
168 |
421 |
588 |
| 2 |
GGAGAATGGTCAAAGACGGA |
60.05 |
20 |
CGGCAATCTTCTGAGTAGCC |
59.978 |
20 |
133 |
421 |
553 |
| 3 |
GAGTGCAAAGGAGAGGCTTG |
60.134 |
20 |
CCCTTCGTTATGGCTGTGTT |
59.993 |
20 |
244 |
345 |
588 |
|
|
