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Simple sequence repeat (SSR)
>UN25549
AGGGACCACCAGAAGATTCGTATCCTTAAAAAAAAATCCCCAGTCGATTCAGAACCCTAAGCGGTGCCATCCTCGCCTCAACAAGACCACAACT
ATTATGGCTGAACCCGATTCTCCCCCTCCTCCTCAGCTGAACTTACCTTCTTTCGTCGTCAACCTGTTCCCCTTCCTCAAACCTAAGTCTTCTG
CTAACGTTGCCGATGGTGGTCCTAAACCCACGGGAGGAGATAAGGAGACTCAGAACTCGACGGTCACTTTCCCTTACAATCCTCCCAAGAGCAC
TGAGCCACTCAAGGTTGAAGCCGAGCCTAGCTCCGGGACCACTTCCAATTCCCTCGTCATTTGGCAGGTATATGCACTTGGAGGGTTTCTTGTC
CTGAAGTGGGCTTGGGCGAGATGGAATGAGAGGAACGAGAACAAGAAGTCAACGGATGATGATGATGATGATGATCAAGCTCCTCATCCGGAAG
ATGATTGATTGATGATGAAGGCTTCTCATATTTGCACGAAGACAATGAAATCTTTTACCCCCCATTTTGGTTCTGTATAGCAGCAAAAACACCC
TTTCAGATTTTCTTATATTCCATTGTATCTCTACTCAAGACTATTGAGTTTCTTCTACTTCTGTAATGACTACGATTCTCCTCTCTCAATCCAG
TTTTTTTTCCTCC |
Primers for UN25549 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTCGTCATTTGGCAGGTAT |
59.955 |
20 |
GAAAGGGTGTTTTTGCTGCT |
59.359 |
20 |
235 |
334 |
568 |
| 2 |
TTGGAGGGTTTCTTGTCCTG |
60.081 |
20 |
GAAAGGGTGTTTTTGCTGCT |
59.359 |
20 |
209 |
360 |
568 |
| 3 |
TTCTTGTCCTGAAGTGGGCT |
59.844 |
20 |
GAAAGGGTGTTTTTGCTGCT |
59.359 |
20 |
200 |
369 |
568 |
|
|
