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Simple sequence repeat (SSR)
>UN25574
TTTTTTTTTAAACAAATTTACTAATTATATAAAACTATAATTACACATCTTTAATTATTGTTTATAATTCATTTTCTACATGGGTATATATAAC
TTTGATCATCGGAGAGGATATCAGAAAAGAGAAACCCTAAAATTCTGCTTTTGGTACTGTAAAATACTATTGAAAAGCAAGAAGTAAATGTTGA
CACACACACACACAAGAAAAACAAGAAGTAGATTACAATCATACCCGAAGAGCTCCAACTTGGACAAGCTTAGGGACAAGGTGACCACTTAGAT
GGAGCGCGACGAGGGACTCAAAACCACCGACACACTCACGACCAATGAAAACCGCCGGAGACGGAAGAACGACGGAGCCGCCGCCGGAATATTC
TTCTTCAAGAGCCATGGGGAGAGAGGAAACCTCGTGATCATCGAGCTCGATGACGGTGGGGACGACTCCTATTGTGGTGAGGAGTCTTTTCATG
ACGTGGGACATGCAACAAGAAGATCTGCTGAAGATGATCACTGGATGCTCTGATATCAGCCGTCGGATCTTGGCCTCCGGTGATTCTTCTTCGT
CTATGGAGAGAGAAGTAGGTGATGTTTGGGGAGGAGTTAGGTCTAAGCGAACGACGTCGTTGGAGAACAGTTCTAAGCTTAATTCTTGCATCAT
AGGCAATTAGAGAGAAAGAAAACGTAGAGAGCATTAATCTATCC |
Primers for UN25574 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACTTTGATCATCGGAGAGGA |
58.729 |
21 |
TGGTCACCTTGTCCCTAAGC |
60.111 |
20 |
184 |
92 |
275 |
2 |
AACTTTGATCATCGGAGAGGA |
58.729 |
21 |
GTTGGAGCTCTTCGGGTATG |
59.694 |
20 |
156 |
92 |
247 |
3 |
AACTTTGATCATCGGAGAGGA |
58.729 |
21 |
GTGTCGGTGGTTTTGAGTCC |
60.408 |
20 |
224 |
92 |
315 |
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