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Simple sequence repeat (SSR)
>UN25633
GCTAGAGGTAGATCAATAAAGCACAACAATACCAATCACAATTTTTTTCTCTTATTGGTAATCCACATGTCCAATAGTTCACACACGTTGAAGC
ACAACGCTTCTTATAACCTCCTTAGCTCTTTCGGCTCAGAAAATCTTAACAAAAACTGCTCAAAACGACATACTGTACCATGTTGCCAACGAAA
AATAGAATCCACGAATTGGTTTTTTTTCCCATGTTATAAGAAGCCCCACACAGATACAAACTCTCTAATGTTTCTCTCTCTCTCTCTTGTGACT
CTTTTGCACTTCGTTTAATCTTGCAAAAGAAAAATGGTGTCTCAGGCGCCTTCTTCTGCCTAAAAACTCTATTTGTTCTTTGCAATGAATAAGA
TAAGAGCACATCTTTTTTTGATTTGAGACTAACCGGTGTACAATCAAACACTACACTTGATATCTCGCAAGCCTTTCTTTTACAGGAGGATCCA
AAGCAGACCAACATTCCGCCCATGAGTCTCCAAGCATTTGTTTATAGCCGTTCAGCACTTGGGAGACTTCGTTATTGACGTCCTCGGTTCTTAT
TTCATGCCAGCTTGCAATGGCTTTGCATATGAAAACAAGTGAGCTGACACCTCCTGATGGATTCGCTTTTACCACTGCACATAACCCTCTAAAT
GCATCTTCTTTCTCAAGGTCATCACGTACCATTGCCAATGCCAAGCACCATGGTTTCATGAAGTGCTCCATGTGAGGTGCAACGAGGTCTGGAC
GAATCCATGCTAGTCTACCGAGGGTAATTGCACTGTTCTCAACTAGTGATTTATTAACAGCCTCTCCATGCTGAAGAATCAGGGCTAGGG |
Primers for UN25633 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACCTCCTTAGCTCTTTCGGC |
59.983 |
20 |
TTTTTAGGCAGAAGAAGGCG |
59.603 |
20 |
239 |
110 |
348 |
2 |
TACCATGTTGCCAACGAAAA |
59.969 |
20 |
TTTTTAGGCAGAAGAAGGCG |
59.603 |
20 |
179 |
170 |
348 |
3 |
TCACACACGTTGAAGCACAA |
59.912 |
20 |
TTTTTAGGCAGAAGAAGGCG |
59.603 |
20 |
270 |
79 |
348 |
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