Simple sequence repeat (SSR)
>UN25675
CTCTAAAATAAAATTGAACCTGATTGATTCATTATCTTTGTGGGTTTTGTCACCATATCTAACGGCAAATTCTAGGGGTATAGCGAAATAAACA
GTAACGTATAAAATAGAATGCAATTACTGGAAACTGATCTCAAATGTGTGGTTAACATATGTTTCCTCTTTCTGAGTATCTGAACAAAACAAAA
AACTGTGAAATTGTTTTCTTGAAACAAGAAAGCTGTTTCTACCCTTCTTCTTCTTCTTCTTCTTCTTCGCTGGTTATCTAGGTGGCACCGACGA
TGATGTTGTTGATGGGAATAAAAATGAGCTTCACAAAGAATCCCACGAATCCCATTACTACAAACCCGATCGCTGTACGGACCGCCACTTTCGT
GAATTCTTTGCGATCTGGTTTGTGACAACGCTTAACGAGGCGAATGCTGTCCTTTGCAAAGTCTCTGAGAGGATCAACGACGGGATCGATGGCG
TCCATGGCTCTTTCTTTGACGACTTTTTTTTATATTTGTCTTCCTTTTTTGGTTTGGGCCCCCC |
Primers for UN25675 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTTGTGGGTTTTGTCACCA |
59.435 |
20 |
TCAACAACATCATCGTCGGT |
59.967 |
20 |
259 |
36 |
294 |
| 2 |
CTTTGTGGGTTTTGTCACCA |
59.435 |
20 |
TCGGTGCCACCTAGATAACC |
59.955 |
20 |
244 |
36 |
279 |
| 3 |
CTTTGTGGGTTTTGTCACCA |
59.435 |
20 |
TCCCATCAACAACATCATCG |
60.33 |
20 |
264 |
36 |
299 |
|
|
