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Simple sequence repeat (SSR)
>UN25738
GGACAACACCAAAACAACCATTAAACAACCTTTAAGAAAGAGAAAAAGAAAAAAAATGGATACTTCGAAGAAGTCGGCATGTGACGGTTGCAAG
GCCAAGGAAACGGAAACCCCTTTGAGCCAAAGCCGTTGTCTCCACCTGACCTTGTGCCGCAGATGCTTCGAAGCGGTTGGGTTTGAAAAGGTAT
CTTGCGATGTCTGCAAGAGAAACCATAAGGACAGCGCAAAGGCGAGGAAGGCAGCTGAGAAAGGCACAACAAGTGGTGGAAGCGGTGCTTCTTA
AAGAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGCATGTTTGAATAAGTAGTTTAAGTTATGTTTGAGTAAGTAGTCTAAGTTATGTTTG
AATAAGTGGTTTTAGTTTAGCCACAAGCTAATGTGGCTATTGTTAAGTTTGGAAGATTAGAAGGGCGATGTAGTTTCTTCATGATAGTTACTCG
CTTGTGGCACCTTCGTTAACCCTTTCAACACTATATCAAGCTTTGGCAAGCTTGTGTCTCTATCCATCTATTGTTATGTCTGTTTAATGCTTGT
GCTAGTAGTTCGTATGGTTCATCGTGGCTTGTCCGATGATACCTTTATCATTGTAACGTTTTAATTAATGAAGAGTTTGGTTGAGCAAA |
Primers for UN25738 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGTTGGGTTTGAAAAGGTA |
59.833 |
20 |
TCGCCCTTCTAATCTTCCAA |
59.778 |
20 |
277 |
168 |
444 |
2 |
CAGCTGAGAAAGGCACAACA |
60.175 |
20 |
TCGCCCTTCTAATCTTCCAA |
59.778 |
20 |
205 |
240 |
444 |
3 |
ACCATAAGGACAGCGCAAAG |
60.27 |
20 |
TCGCCCTTCTAATCTTCCAA |
59.778 |
20 |
235 |
210 |
444 |
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