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Simple sequence repeat (SSR)
>UN26040
CCTTTCTGTTCCAAAACAAATGATATCGTTGTCAACCATCATTTTACTTATTATATTACATATCTAGAGTAGTATTATGTTCGAATTGTCACAA
CTGAAACAAAAACAACCAACCTTTTTTAGAAAAAAAATGGAACAATCATTCTTATGTGGTTAGCAGGATCAGTCCTAGACTTGAGTGGCTGCAG
ATTCTTGTGCTTCAACAGCAGCCTCCGTCTCTGCTTTAGCTACTTCCTCAGGAGTCTTGCCATTGGTCACAGGTGGCACCAAAGAGTCGAACTT
GTCTGATTTCCCCAACACAATCTCAATCTTTGCTTTCTGAACCATCTTTCCTTTGGTCTCATCCTTCATTCCCACAGTGGATGTCAACACTTTC
TTCTCTGTAGCCAATCCATTGTTCTTCAAGATCTCAGAGATTGTTACAACCGTCGTGATTGCCATCCCGAGTGCAGAGAGTTCAACCTCATTGT
GTTGCTGAATGTACCTCTTGGCGAGATTAACGTAGAAGAACAGTGGCTTCTTCGTGTTGGAGACTTGGATCCTGTTCTTCTTGTGAGTCTCCGT
CTTTGCTGGTGTGAGGATGATGTTTATCTCCGGTGCTGTGATCGGTGCAGGGGCCGGTGTCGCTATTTGCATCGCCATCTTCTTCTTGGTCACT
CTCGTTCTTTCAGTTTCTTCTCTCTCTCTCTGAGTAAAACTTCTATTTGATAGCGGGAATCC |
Primers for UN26040 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCTGGTGTGAGGATGATGT |
60.121 |
20 |
GGATTCCCGCTATCAAATAGAA |
59.445 |
22 |
153 |
568 |
720 |
2 |
GGCTTCTTCGTGTTGGAGAC |
59.851 |
20 |
GGATTCCCGCTATCAAATAGAA |
59.445 |
22 |
206 |
515 |
720 |
3 |
CTTTGCTGGTGTGAGGATGA |
59.831 |
20 |
GGATTCCCGCTATCAAATAGAA |
59.445 |
22 |
156 |
565 |
720 |
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