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Simple sequence repeat (SSR)
>UN26070
TATTATTAAGAATCAGATTCAGATACATATGTAAGAAGAAAATAAATTATAAATCGAGAATGCAACCTTATGGCAATATACACAGAAACACATC
CACAGGTGACAGGTCTTGGTCACAAAAAGTGTCATCCTTCTCTTAAAACATTCAAATAAGACTGGCTTTGATGATACACACAAAAAGATGAAAA
CGATCAACGTGAAGATTTATCGGTGTCCACTTGACGTTTTGAAGCTTTATTTTATGTCTTAATCGAGCTTCACGTTTGAATATAGGAGCGTGTC
CTTCGTCAACGGCATGTACATAAGGAAGTACACCCCAAGGATAGTTGCAATGAGAAGGATTATTCCAGTTAACCATGCAAGCGTCAGCCTAACA
AGTATAACTTGGGCGATAATGGCTGCACTTGGAACTCCCTCTACCTCAGCCATCGACCGTGCAGATGAACCATAAGAAGAAGACCCAACGCTTA
GGAATTAGCGGTTTCTTGATTTACTCTCTCATCAAGGAGAATCACCCCAACAATTTGGCCTTTATGAGATGTCTCCAACAGATCGAATAGCTTT
GATAGTGTGGCAAGCAGTACATCCATCCCTTGCTTGGCTATACCTTGTCCATACTCTTGTGCTAAAGCATGGATACCGCCAAAGCGTCCAACCG
TTAACTCAGCAGGTCTCTCAATACCATGAGCCAAATCCTCATGAAGAGTGACTAACCCTCTTATATTCTTATATAAAGCCAAAAGGTTCGATGC
AAATTTTCTCTCAGCTTCCTTTTCCAAATGGAACTCCACGTTAGCACCACCAGAGAGAGGGATACTAAGCAATCCAGTCAATGGTTCAGCAGAG
CCAGCGACATATGATCCACCCAACCAAGATGCAAACTCATTCATGTCTTTATCAGTCGCATCAGATGAGGGTTCATTGACAGACATAACAGCCA
CTCCACTCTCTGGAAGTTCAATATCAGCTTTTCCAGAATTGGAATTGATACTGCCTCTAATGGCATTGTCCAAGAAAGAATGACTAGGTAAGGT
TTCCACAAGCGCATCATCAGCTCCAGCGATTTCTAGCACAAAAGCAGCACGAGGCCTCTCAAATGGATTAGGTTTTAGAATCTTGTTCAGCTTG
GAGGAGCCATCAGGTGTCAAAGTAGATGAAGGTGCAAAACCCAACAAGGCAGACACAGCTGCAGATACTTCAGAGAGAGACATGGGAAGCGCCT
GCTCTGAAGAGGGACGAAGGTATTGGTTGTTGGATCCATCAATGAAGAAAACAGAACCAATGGCTTCTCCCCTGGAGTTGAAGGTGAGAAGCAG
AGAGACGACGAATATGTACAAAGCTTGTATCTTTAGAACCAGAAAGGAGGGGGGTGGGGGAGAGAGAGAGATCGGAGTTAATCTGGCGAGAGAT
AAGTTTAATGGAGGAGACAAGACAAAGCCAGATTTCGTGATGGAAGTGGTAGACACACCTTTGGCAATCAATACC |
Primers for UN26070 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCTGGAGTTGAAGGTGAGA |
60.229 |
20 |
TGCCAAAGGTGTGTCTACCA |
60.152 |
20 |
185 |
1292 |
1476 |
| 2 |
TAGAACCAGAAAGGAGGGGG |
60.426 |
20 |
TGCCAAAGGTGTGTCTACCA |
60.152 |
20 |
127 |
1350 |
1476 |
| 3 |
AGAGAGAGACATGGGAAGCG |
59.555 |
20 |
TGCCAAAGGTGTGTCTACCA |
60.152 |
20 |
277 |
1200 |
1476 |
|
|
