 |
Simple sequence repeat (SSR)
>UN26804
AAAAAATCAATTCTAGGGTTTGTTCGTTATTTCGTTTTCCTCTTCCAAAATCCATTTTCGAATTTGACCCTTCTTTCTTCGCCGGAGAGAAGGG
AGAAGATGAGAGGTTCCTCCAACGACGCCGATCTATTCGACCCCAAGACGGAGATGGATTCCAATTTCTCTCGCCACGGCTCTTCCTCCTCCTC
CTCCTCCGAAGGCGATTTCGGATTTGCCTTCAACGACAGCAACTTCTCCGACCGTTTGCTCCGGATCGAGATCATGGGCGGGGCGTCGGATTCC
AGGTCTGATATTGGGGAAGGAGGGTGCACGAGTATTGCCGATTGGGCTCGTCATCGCAAGAGGAGAAGAGAGGAGAACAAGAAGAAGGATAATG
GTGTTACGGTTTCGGACATTGTGGCATGTCCTGAAGAGCAGATTATAACTGATAATAACCAACCTGATATGGATGATTGTCCTGGTGGTGATGA
AGAAGGAGAGGCTATGGTGGAAGAGGAGGAGACTCTCTCAGGTGATGACGATGCATCTAGTGAGCCAAATTGGGGAATGGACCATTCTACTGTT
GTTAATGTTAAGGAATTGCATATTAGCTCTCCTATCTTGGCTGCTAAAAGCCCTTTCTTCTACAAGCTCTTTTCTAATGGAATGAGGGAATCAG
AACAAAGACATGTAACCCTTAGAATCAGTGCACAAGAGGAAGGTGCTTTGATGGAACTTTTAAACTTTGTGTATAGCAACTCTCTAACTGTCAC
AACAGCACCTGCTTTGTTAGATGTGCTTATGGCTGCTGACAAGTTTGAGGTTGCTTCCTGCATGAGGTATTGCAGTAGACTTCTCCGCAATATG
CCTATGACTCCCGATTCCGCTTTGCTCTATCTCGAGCTCCCCTCCAGCGTCTTAATGGCGGAAGCTGTCCAGCCTCTAACTGATGCATCAAAAC
AGTTCCTTGCCTCGCGCTTCAAGGATATCACCAAGTTCCAGGAGGAGGTTATGGCCTTACCCTTGGCCGGAATCGAGGCGATACTATCAAGCGA
TGATCTCCAAATTGCTTCTGAGGATGCTGTTTACGACTTTGTGTTGAAATGGGCGAGGGGACAGTACAGTTCGTTGGAAGACCGTAGAGAGATT
CTTGGCTCACGCCTTGCCCTCTACATCCGCTTCCCATACATGACGTGCAGAAAACTCAAAAAGGTACTAACATGCAGTGACTTTGATCACGAAG
TAGCGTCAAAGCAGGTCCTAGAAGCGCTCTTCTTCAAAGCAGAAGCCCCGCACAGGCAACGCATCCTAGCCGCGGAAGGATCAGACTCAGTGAA
CCGCCGTTTCATAGAGAGGGCTTACAAATACAGACCTGTGAAAGTCGTCGAGTTCGAGCTTCCTCGTCCGCAGTGCGTAGTGTACCTGGACTTG
AAGCGAGAGGAATGCACAGGACTGTTCCCTTCGGGGAGAGTCTACTCTCAGGCCTTTCACTTAGGTGGTCAAGGCTTCTTCCTCTCTGCTCATT
GTAACATGGACCAGCAAAGCTCGTTCCACTGCTTTGGTCTCTTCCTTGGGATGCAAGAGAAAGGAGCTGTGAGCTTTGGTGTGGACTACGAGTT
CGCGGCTAGAGAGAAGCCTTCTCAGGATTACGCTTGCAAATACAAAGGGAACTACACGTTCACTGGTGGCAAAGCTGTTGGTTACAGAAACCTC
TTTGGGATTCCTTGGACTTCGTTTATCGCTGAGGATAGTCAATACTTCATCAATGGCATTCTCCATCTCCGAGCTGAGCTCACCATTAAAAGAT
CAACAGAAATTCACTGATCAACAACTCTCTACTCTCTCTCTCTCTCCTCTTCATGTAGCAGCTCAAACCAAGAGTGTCTTTTGTAATTTGCTTA
CGAGCAGTAAAAGAGTATCCACGCTGTAAATTTAATTGGAAGTTAACTTATCTATTTGCACT |
Primers for UN26804 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGATCTATTCGACCCCAAGA |
60.029 |
20 |
CAATACTCGTGCACCCTCCT |
60.134 |
20 |
197 |
123 |
319 |
| 2 |
CCGGAGAGAAGGGAGAAGAT |
59.772 |
20 |
TTGAAGGCAAATCCGAAATC |
60.016 |
20 |
140 |
82 |
221 |
| 3 |
TGAGAGGTTCCTCCAACGAC |
60.238 |
20 |
TTGAAGGCAAATCCGAAATC |
60.016 |
20 |
121 |
101 |
221 |
|
|
