 |
Simple sequence repeat (SSR)
>UN26804
AAAAAATCAATTCTAGGGTTTGTTCGTTATTTCGTTTTCCTCTTCCAAAATCCATTTTCGAATTTGACCCTTCTTTCTTCGCCGGAGAGAAGGG
AGAAGATGAGAGGTTCCTCCAACGACGCCGATCTATTCGACCCCAAGACGGAGATGGATTCCAATTTCTCTCGCCACGGCTCTTCCTCCTCCTC
CTCCTCCGAAGGCGATTTCGGATTTGCCTTCAACGACAGCAACTTCTCCGACCGTTTGCTCCGGATCGAGATCATGGGCGGGGCGTCGGATTCC
AGGTCTGATATTGGGGAAGGAGGGTGCACGAGTATTGCCGATTGGGCTCGTCATCGCAAGAGGAGAAGAGAGGAGAACAAGAAGAAGGATAATG
GTGTTACGGTTTCGGACATTGTGGCATGTCCTGAAGAGCAGATTATAACTGATAATAACCAACCTGATATGGATGATTGTCCTGGTGGTGATGA
AGAAGGAGAGGCTATGGTGGAAGAGGAGGAGACTCTCTCAGGTGATGACGATGCATCTAGTGAGCCAAATTGGGGAATGGACCATTCTACTGTT
GTTAATGTTAAGGAATTGCATATTAGCTCTCCTATCTTGGCTGCTAAAAGCCCTTTCTTCTACAAGCTCTTTTCTAATGGAATGAGGGAATCAG
AACAAAGACATGTAACCCTTAGAATCAGTGCACAAGAGGAAGGTGCTTTGATGGAACTTTTAAACTTTGTGTATAGCAACTCTCTAACTGTCAC
AACAGCACCTGCTTTGTTAGATGTGCTTATGGCTGCTGACAAGTTTGAGGTTGCTTCCTGCATGAGGTATTGCAGTAGACTTCTCCGCAATATG
CCTATGACTCCCGATTCCGCTTTGCTCTATCTCGAGCTCCCCTCCAGCGTCTTAATGGCGGAAGCTGTCCAGCCTCTAACTGATGCATCAAAAC
AGTTCCTTGCCTCGCGCTTCAAGGATATCACCAAGTTCCAGGAGGAGGTTATGGCCTTACCCTTGGCCGGAATCGAGGCGATACTATCAAGCGA
TGATCTCCAAATTGCTTCTGAGGATGCTGTTTACGACTTTGTGTTGAAATGGGCGAGGGGACAGTACAGTTCGTTGGAAGACCGTAGAGAGATT
CTTGGCTCACGCCTTGCCCTCTACATCCGCTTCCCATACATGACGTGCAGAAAACTCAAAAAGGTACTAACATGCAGTGACTTTGATCACGAAG
TAGCGTCAAAGCAGGTCCTAGAAGCGCTCTTCTTCAAAGCAGAAGCCCCGCACAGGCAACGCATCCTAGCCGCGGAAGGATCAGACTCAGTGAA
CCGCCGTTTCATAGAGAGGGCTTACAAATACAGACCTGTGAAAGTCGTCGAGTTCGAGCTTCCTCGTCCGCAGTGCGTAGTGTACCTGGACTTG
AAGCGAGAGGAATGCACAGGACTGTTCCCTTCGGGGAGAGTCTACTCTCAGGCCTTTCACTTAGGTGGTCAAGGCTTCTTCCTCTCTGCTCATT
GTAACATGGACCAGCAAAGCTCGTTCCACTGCTTTGGTCTCTTCCTTGGGATGCAAGAGAAAGGAGCTGTGAGCTTTGGTGTGGACTACGAGTT
CGCGGCTAGAGAGAAGCCTTCTCAGGATTACGCTTGCAAATACAAAGGGAACTACACGTTCACTGGTGGCAAAGCTGTTGGTTACAGAAACCTC
TTTGGGATTCCTTGGACTTCGTTTATCGCTGAGGATAGTCAATACTTCATCAATGGCATTCTCCATCTCCGAGCTGAGCTCACCATTAAAAGAT
CAACAGAAATTCACTGATCAACAACTCTCTACTCTCTCTCTCTCTCCTCTTCATGTAGCAGCTCAAACCAAGAGTGTCTTTTGTAATTTGCTTA
CGAGCAGTAAAAGAGTATCCACGCTGTAAATTTAATTGGAAGTTAACTTATCTATTTGCACT |
Primers for UN26804 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCATCAATGGCATTCTCCA |
60.009 |
20 |
GACACTCTTGGTTTGAGCTGC |
60.05 |
21 |
127 |
1738 |
1864 |
| 2 |
ACGCTTGCAAATACAAAGGG |
60.131 |
20 |
GACACTCTTGGTTTGAGCTGC |
60.05 |
21 |
237 |
1628 |
1864 |
| 3 |
ACTACGAGTTCGCGGCTAGA |
60.176 |
20 |
GACACTCTTGGTTTGAGCTGC |
60.05 |
21 |
276 |
1589 |
1864 |
|
|
