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Simple sequence repeat (SSR)
>UN26888
GGGGGGTTAAAAACCTATAAAAGAATCAAAACAAACTTTCCAAAATCTCAGCTCATCCGATCTGCTGCCTCCTGCCTTTTGACTCCTCCTTGAT
AAGAAGAAGAAGAAGAAGAAGAGGAATCCAAAACTTCTCCGATCTTCTTCAAACACCAAAAATAATCCCTAAAAATCAGATCGTTTGCTTTTTT
ATATTGATTTGTGGTGGGCAATGGAGTTTAATGGAGATGATGAGTCTAGCTTCGAGCAGTGTTACCGTTGTTACCCTGTCACATTCATTGAAAA
GGCACATCTTGACAAGGGGGACAAAATTATAATGCCTCCTTCCGCTCTCAACCGTCTTGCTTCTTTGCATATTGAGTACCCAATGTTGTTTCAA
CTGAGTAATGAATCTGTTGGCAAGATCACACATTGTGGTGTACTCGAGTTCACCGCAGACGAAGGCCTTGTTTACTTTCCCTATTGGATGATGC
AAAACATGTCTCTTCAAGAAGGAGACATTGTGAGAATCAAGAATATGAGTTTGGTGAAAGGGACTTACATCAAGCTTCAGCCTCACACTCAAGA
TTTCTTGGACATTACCAACCCAAAAGCCATCTTGGAGACTACGCTTAGGAGCTACTCTTGCTTGACCACTGGCGACACAATCATGGTTCCTTAC
AACAACAAGCAGTATTTTATCAATGTGGTTGAAGCGAAGCCGTCGTCAGCTGTGAGTATCATAGAAACGGACTGCGAGGTTGATTTCGCTCCTC
CTCTTGATTACAAAGAACCTGAGAAGCCGCAGAAGCTGACTCCTCTAAAGAAGCGAACTCGCCAAGTTGAGGAAGAGGAACCAGCAATCAAAGT
TCCCAAGTTCACGCCATTCACTGGGTCCGGAAAGCGTTTGGATGGGAAGACACAAACAGAATCAACTGAACAAGAAGAGAAGCCAACTAAGGGA
GAGGATGAAGAGAAGCTGTCAAGCATAACGCCACCGCAAAAATCAGGGAAGCTTGTCTTTGGCTCAAACAGCAAACAAACTTCAAAAGCAAATG
TGAAAGTTGATCCAAAGAACGTGGAGCAAGAAAGTTCGACTAAATTTGATGAAGCTAAGTTTAAAGTGTTTACTGGGAAGAAATACTCACTCAA
GGGTTAAGAAAAAAACATAGGTTTTTTTTTAAAGTTCAATCATCTGCTGATGAATATTTATTAGTTTTTTTTCTTCCTTTTCACAACATTTATT
TGTTAAGCATTTTTTATATTCATATATTATCGAACCAATTTATGGG |
Primers for UN26888 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGCCTTTTGACTCCTCCTTG |
60.366 |
20 |
ATTGCCCACCACAAATCAAT |
60.059 |
20 |
138 |
73 |
210 |
| 2 |
TGCCTTTTGACTCCTCCTTG |
60.366 |
20 |
CAACGGTAACACTGCTCGAA |
59.904 |
20 |
186 |
73 |
258 |
| 3 |
TGCCTTTTGACTCCTCCTTG |
60.366 |
20 |
CCCTTGTCAAGATGTGCCTT |
60.111 |
20 |
228 |
73 |
300 |
|
|
