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Simple sequence repeat (SSR)
>UN27002
GGTGAAGTGAGTAACCATGATAATTGCGTCAGCAATGGGGAAGCATCAGACAAAAGCAATGGTTTATTTGTTGACACCTCGCACGTAGATGATG
ACGATGATGTTGGTCGATTTCTGTACTTAGAAGGTGTGGAGTATGTGATGTGGAACACGTATGATGTGCACTTTTACGCATCATATGCGCTCCT
TATGCTCTTCCCGAAGATCGAACTAAATATCCAGCGGGATTTCGCTAAAGCCGTGCTGTCCGAAGATGGGAGGAAGGTTAAGTTCCTTGCAGAG
GGGAACTTGGGAATCCGCAAGGTCAGAGGCGCTGTTCCTCACGATCTAGGGATGCATGATCCGTGGAACGAAATGAATGCCTACAACATACACG
ACACAAGCAAGTGGAAAGATCTTAACCCGAAGTTTGTGCTTCAGGTGTATAGAGATTTCGCAGCTACAGGGGATTACCAGTTTGGTATAGACGT
CTGGCCAGCAGTTCGTGCTGCTATGGAGTACATGGAACAGTTCGATAGAGACAACGACGATCTTATAGAGAACGACGGTTTCCCTGATCAGACA
TATGATACATGGACCGTTCATGGCGTGAGCGCCTACTGCGGTTGCCTGTGGCTTGCTGCTCTTCAGGCTGCAGCGGCAATGGCTCTCCAGATCG
GTGATAAGTTCTTTGCGGAATTGTGCAAGAACAAGTTTTTGAATGCGAAGGCAGCGTTGGAAGCGAAGCTCTGGAACGGAACTTACTTCAACTA
TGACAGCGGGGCGAGCAGCAACAGCAAATCTATACAGACGGATCAGCTTGCGGGTCAGTGGTATACTGCGTCCTCAGGTCTGCCTCCGATCTTC
GAGGATTCTAAAATCAAAAGCACTTCGCAAAAGATCTTTGATTTCAATGTCATGAAGACGAAAGGAGGGAGAATGGGTGCTGTAAATGGGATGC
ATCCTGATGGGAAAGTGGATGAGACGTGCATGCAGTCACGTGAGATATGGACAGGTGTCACGTATGCAGCAGCAGCTACTATGATCCTCTCTGG
AATGGAGGAACAAGGGTTCACTACTGCTGAGGGAATCTTCACAGCTGGGTGGTCAGAAGAGGGTTTCGGATACTGGTTCCAGACACCGGAAGGT
TGGACAATGGATGGGCATTACAGGTCATTGATATACATGAGGCCTCTCGCAATATGGGGAATGCAATGGGCGTTGTCGCTGCCAAAGGCAATTC
TTGATGCGCCTAAGATCAACATGATGGATAGAGTTCACATGTCCCCTAGAAGCCGCAGATTCTCTCACAACTCCAGAGTTGTAAAACACAAAGC
TAAGTGTTTTGGAGATTCTTCTTTAAGCTGTTCCTGCTAAGTGATTAGACAGAGGTTTCTGGTTTGTAATGTAATTAAACAGGTGGGAAATATT
TCCATGAAAAATAATGGAAATCTTGCGGTACAAATTGCTCATAAAGAGAGAGAGAGAAAGAGAGTTTATGTTTTTTCATGAAAATGATAAGTTT
GTAACCAAACTGTTTGCTTTGGTAACCTGAGAAGAACATTTTGTATCAAGTCTCCTTA |
Primers for UN27002 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCACATGTCCCCTAGAAGCC |
60.073 |
20 |
TCTCAGGTTACCAAAGCAAACA |
59.785 |
22 |
280 |
1257 |
1536 |
| 2 |
GAAGCCGCAGATTCTCTCAC |
60.104 |
20 |
TCTCAGGTTACCAAAGCAAACA |
59.785 |
22 |
266 |
1271 |
1536 |
| 3 |
CTTGCGGTACAAATTGCTCA |
59.872 |
20 |
TCTCAGGTTACCAAAGCAAACA |
59.785 |
22 |
105 |
1432 |
1536 |
|
|
