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Simple sequence repeat (SSR)
>UN27144
ACAGTGACAGTTCCATCCCCTTCACTTTCCTGTCGGATCCAAACTTGGTGTCACGAGATTCAAGCAGCCATGGCAAGTCTTATGATGGCCACAC
CGTTTCCAGGATCTCTCACTCAATGCAAGAAAACGAATAACTTGTCTGTTCAGAGAGCCTTTAAGGTTACATGTATGCAGACACCTTTGGAGGA
GCTATACAACGTCAAAGTGGAAAGGAAAGTGTCAGAGAGACGGTTAGAGGAGCTAGGGGTTTCGAGATGGTCAGTTTGGAAGACTGGGAAATGC
AAACTGCCGTGGGACTGGCAGGTTGATCAGTTGGTTTACATTGAAGAAGGAGAGGTTCGTGTCGTCCCCGAAGGCAGCAAGAGGTTTATGCAGT
TTTTGGCTGGAGATCTTGTTAGGTACCCGAAATGGTTTGAGGCTGATCTTTTCTTCAACGCTCCTTACCGCTAACGGTATTGTTTCAAGGCCTA
TGGTGATGATTGATTCCAATGTAGAGTTTTTGAGTTTAGAGCCCCCATGAAAGTTTGCACTTGTGTTTGTGTTGTTGTTGTTGTTGTAGTCTTA
TGGATCTTTTTTGGGATGATAAAATAACAAAACAATTTGTCTTATTCTTCTTCAGAAATTTGTGTAACGCTTACATAAAGT |
Primers for UN27144 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGAAATGGTTTGAGGCTGAT |
60.074 |
20 |
CGTTACACAAATTTCTGAAGAAGAA |
58.954 |
25 |
230 |
404 |
633 |
2 |
TTTTGAGTTTAGAGCCCCCA |
59.679 |
20 |
CGTTACACAAATTTCTGAAGAAGAA |
58.954 |
25 |
136 |
498 |
633 |
3 |
AGGCAGCAAGAGGTTTATGC |
59.481 |
20 |
CGTTACACAAATTTCTGAAGAAGAA |
58.954 |
25 |
280 |
354 |
633 |
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